RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PENKP01210 267 aaPredicted RBP17.34■□□□□ 0.37
RNF40-206ENST00000564260 FAM228BP0C875 321 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 PDGFRAP16234 1089 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 FECHP22830 423 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 RRM1P23921 792 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 RDXP35241 583 aaKnown RBP17.34■□□□□ 0.37
RNF40-206ENST00000564260 FLT3P36888 993 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 CXCR3P49682 368 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 AIF1P55008 147 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 ADKP55263 362 aaKnown RBP17.34■□□□□ 0.37
RNF40-206ENST00000564260 ACAP1Q15027 740 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 MPPE1Q53F39 396 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 LY6G5CQ5SRR4 150 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 TTC39BQ5VTQ0 682 aaPredicted RBP17.34■□□□□ 0.37
RNF40-206ENST00000564260 ASTLQ6HA08 431 aaPredicted RBP17.34■□□□□ 0.37
RNF40-206ENST00000564260 TTC16Q8NEE8 873 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 PJA1Q8NG27 643 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 CENPIQ92674 756 aaPredicted RBP17.34■□□□□ 0.37
RNF40-206ENST00000564260 TAS2R14Q9NYV8 317 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 NENFQ9UMX5 172 aa17.34■□□□□ 0.37
RNF40-206ENST00000564260 A0A0A0MRY4 1105 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 OTOL1A6NHN0 477 aaPredicted RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 AKR1B10O60218 316 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 CACNG3O60359 315 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 ADCY5O95622 1261 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 HMBSP08397 361 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 GPD1P21695 349 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 EIF4A3P38919 411 aaKnown RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 SULT1E1P49888 294 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 ZNF143P52747 638 aaPredicted RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 RNASE9P60153 205 aaKnown RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 DEUP1Q05D60 604 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 GRSF1Q12849 480 aaKnown RBP eCLIP17.33■□□□□ 0.36
RNF40-206ENST00000564260 MAMLD1Q13495 774 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 C2CD6Q53TS8 623 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 TMEM196Q5HYL7 178 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 RNF43Q68DV7 783 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 DCUN1D2Q6PH85 259 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 MAMSTRQ6ZN01 415 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 KCNV2Q8TDN2 545 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 CD101Q93033 1021 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 CLDN23Q96B33 292 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 P2RY13Q9BPV8 354 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 CNPY3Q9BT09 278 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 RETREG1Q9H6L5 497 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 WDCPQ9H6R7 721 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 NHEJ1Q9H9Q4 299 aaPredicted RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 LUC7LQ9NQ29 371 aaKnown RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 C11orf16Q9NQ32 467 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 ARHGEF38Q9NXL2 777 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 CNOT8Q9UFF9 292 aaKnown RBP17.33■□□□□ 0.36
RNF40-206ENST00000564260 INTUQ9ULD6 942 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 SIT1Q9Y3P8 196 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 TECTAO75443 2155 aa17.33■□□□□ 0.36
RNF40-206ENST00000564260 SHISA7A6NL88 538 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 PLEKP08567 350 aaPredicted RBP17.32■□□□□ 0.36
RNF40-206ENST00000564260 RFC1P35251 1148 aaPredicted RBP17.32■□□□□ 0.36
RNF40-206ENST00000564260 ARL13BQ3SXY8 428 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 CCDC122Q5T0U0 273 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 CWF19L1Q69YN2 538 aaKnown RBP17.32■□□□□ 0.36
RNF40-206ENST00000564260 TMTC1Q8IUR5 882 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 ETFBKMTQ8IXQ9 262 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 ZNF687Q8N1G0 1237 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 ADAM32Q8TC27 787 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 RXFP2Q8WXD0 754 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 RNF34Q969K3 372 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 WBP2Q969T9 261 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 ZNF653Q96CK0 615 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 C1orf74Q96LT6 269 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 HAPLN3Q96S86 360 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 PRRX2Q99811 253 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 BBS2Q9BXC9 721 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 FBXO10Q9UK96 956 aa17.32■□□□□ 0.36
RNF40-206ENST00000564260 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 TMCO5BA8MYB1 307 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 TYRP14679 529 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 GSDMDP57764 484 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 GAB4Q2WGN9 574 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 ANO4Q32M45 955 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 CCDC14Q49A88 953 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 ZC3H12AQ5D1E8 599 aaKnown RBP17.31■□□□□ 0.36
RNF40-206ENST00000564260 OTUD1Q5VV17 481 aaPredicted RBP17.31■□□□□ 0.36
RNF40-206ENST00000564260 FYB2Q5VWT5 728 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 TMEM25Q86YD3 366 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 HJURPQ8NCD3 748 aaPredicted RBP17.31■□□□□ 0.36
RNF40-206ENST00000564260 NTAN1Q96AB6 310 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 MCEEQ96PE7 176 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 PNKPQ96T60 521 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 TBCBQ99426 244 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 KCNH6Q9H252 994 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 DEC1Q9P2X7 70 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 UVRAGQ9P2Y5 699 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 SLC27A6Q9Y2P4 619 aa17.31■□□□□ 0.36
RNF40-206ENST00000564260 TMEM191CA6NGB0 347 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 FAM170BA6NMN3 283 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 EIF3CLB5ME19 914 aaKnown RBP17.3■□□□□ 0.36
RNF40-206ENST00000564260 STK25O00506 426 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 LCA5LO95447 670 aa17.3■□□□□ 0.36
RNF40-206ENST00000564260 CYP1A2P05177 515 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms