RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 NDRG1Q92597 394 aaKnown RBP17.47■□□□□ 0.39
CCNF-203ENST00000564236 FOXJ1Q92949 421 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 HSFY1Q96LI6 401 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 MKRN2Q9H000 416 aaKnown RBP17.47■□□□□ 0.39
CCNF-203ENST00000564236 ITM2CQ9NQX7 267 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 CYP8B1Q9UNU6 501 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 CNTN6Q9UQ52 1028 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 MYO18AQ92614 2054 aaKnown RBP17.47■□□□□ 0.39
CCNF-203ENST00000564236 ATXN2Q99700 1313 aaKnown RBP17.47■□□□□ 0.39
CCNF-203ENST00000564236 BICDL2A1A5D9 508 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 RNF225M0QZC1 329 aaPredicted RBP17.46■□□□□ 0.39
CCNF-203ENST00000564236 NCAM1P13591 858 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 KCNA4P22459 653 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 CD6P30203 668 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 COPAP53621 1224 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 RING1Q06587 406 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 CETN1Q12798 172 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 ZNF234Q14588 700 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 MEA1Q16626 185 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 PMF1Q6P1K2 205 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 TMEM270Q6UE05 265 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 TRIM59Q8IWR1 403 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 TRIML1Q8N9V2 468 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 CADM4Q8NFZ8 388 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 DDI1Q8WTU0 396 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 DNASE2BQ8WZ79 361 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 AZIN2Q96A70 460 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 SLC6A17Q9H1V8 727 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 PRDM16Q9HAZ2 1276 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 CD93Q9NPY3 652 aa17.46■□□□□ 0.39
CCNF-203ENST00000564236 DNAAF2Q9NVR5 837 aaKnown RBP17.46■□□□□ 0.39
CCNF-203ENST00000564236 WSB2Q9NYS7 404 aaPredicted RBP17.46■□□□□ 0.39
CCNF-203ENST00000564236 ARHGAP33O14559 1287 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 GNA14O95837 355 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 HLA-FP30511 346 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 GFPT1Q06210 699 aaPredicted RBP17.45■□□□□ 0.38
CCNF-203ENST00000564236 ZNF252P-AS1Q0IIN9 211 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 LRMPQ12912 555 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 ST3GAL2Q16842 350 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 SMYD5Q6GMV2 418 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 PPM1KQ8N3J5 372 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 WFIKKN2Q8TEU8 576 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 EDEM1Q92611 657 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 HSPA12BQ96MM6 686 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 TMEM245Q9H330 911 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 SUSD2Q9UGT4 822 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 SFMBT1Q9UHJ3 866 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 PCDH15Q96QU1 1955 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 ASPMQ8IZT6 3477 aa17.45■□□□□ 0.38
CCNF-203ENST00000564236 CACNA1BQ00975 2339 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 IRAK2O43187 625 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 GJB3O75712 270 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 FBXO21O94952 628 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 OXTRP30559 389 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 NNTQ13423 1086 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 CAMK2GQ13555 558 aaPredicted RBP17.44■□□□□ 0.38
CCNF-203ENST00000564236 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 SYCP2LQ5T4T6 812 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 NUGGCQ68CJ6 796 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 BEND5Q7L4P6 421 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 TMPRSS6Q8IU80 811 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 EHBP1Q8NDI1 1231 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 NELFBQ8WX92 580 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 KAT5Q92993 513 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 PCED1AQ9H1Q7 454 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 PCDHB4Q9Y5E5 795 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 CEP295Q9C0D2 2601 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 USP24Q9UPU5 2620 aa17.44■□□□□ 0.38
CCNF-203ENST00000564236 KCNJ18B7U540 433 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 SYNCRIPO60506 623 aaKnown RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 NDUFS2O75306 463 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 CFIP05156 583 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 SYPP08247 313 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 PRKCHP24723 683 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 MAPK8P45983 427 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 TPMTP51580 245 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 SLC14A1Q13336 389 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 WDR45BQ5MNZ6 344 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 KIAA1324Q6UXG2 1013 aaKnown RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 ADIPOR2Q86V24 386 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 UNC45BQ8IWX7 931 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 DEFB119Q8N690 84 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 ZNF557Q8N988 423 aaPredicted RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 TMA16Q96EY4 203 aaKnown RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 SIPA1Q96FS4 1042 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 TOE1Q96GM8 510 aaKnown RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 KREMEN1Q96MU8 473 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 TMEM121BQ9BXQ6 578 aaPredicted RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 SLC32A1Q9H598 525 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 FBRSQ9HAH7 460 aa17.43■□□□□ 0.38
CCNF-203ENST00000564236 MAP1BP46821 2468 aaKnown RBP17.43■□□□□ 0.38
CCNF-203ENST00000564236 M0QYV0 167 aa17.42■□□□□ 0.38
CCNF-203ENST00000564236 MSI1O43347 362 aaKnown RBP17.42■□□□□ 0.38
CCNF-203ENST00000564236 LTFP02788 710 aa17.42■□□□□ 0.38
CCNF-203ENST00000564236 FYNP06241 537 aa17.42■□□□□ 0.38
CCNF-203ENST00000564236 LCP1P13796 627 aa17.42■□□□□ 0.38
CCNF-203ENST00000564236 BRD2P25440 801 aaKnown RBP17.42■□□□□ 0.38
CCNF-203ENST00000564236 GPD2P43304 727 aa17.42■□□□□ 0.38
CCNF-203ENST00000564236 KCNH2Q12809 1159 aa17.42■□□□□ 0.38
CCNF-203ENST00000564236 UAP1L1Q3KQV9 507 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms