RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 TDRD15B5MCY1 1934 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 WDR27A2RRH5 827 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 PRAMEF27A3QJZ7 478 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MTMR11A4FU01 709 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 LRRC53A6NM62 1247 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 A8MXQ7 604 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 H7C4K7 107 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 O00370 1275 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 CLDN5O00501 218 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 GSC2O15499 205 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 CYP26A1O43174 497 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MFAP3LO75121 409 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 CLASP2O75122 1294 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 PAEPP09466 180 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MYCLP1P12525 358 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 KRT5P13647 590 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 PTPN1P18031 435 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TRIM21P19474 475 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 NDUFV1P49821 464 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MRE11P49959 708 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 CACNA2D1P54289 1103 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 YWHAEP62258 255 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ZBED6P86452 979 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 NFKB2Q00653 900 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ROR1Q01973 937 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 GOLGA8FQ08AF8 430 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 GOLGA8DPQ0D2H9 430 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 GPR17Q13304 367 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TRIM14Q14142 442 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 SMC1AQ14683 1233 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MDH1BQ5I0G3 518 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 KIAA1841Q6NSI8 718 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 LILRA6Q6PI73 481 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TMEM270Q6UE05 265 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 PAQR9Q6ZVX9 377 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 Q7L0L9 218 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 IRF2BP2Q7Z5L9 587 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ACOT1Q86TX2 421 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 FUKQ8N0W3 1084 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TTC9BQ8N6N2 239 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 C12orf29Q8N999 325 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 B3GALNT2Q8NCR0 500 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MYCBPAPQ8TBZ2 947 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 SLC22A17Q8WUG5 538 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TFAP2BQ92481 460 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 DDX1Q92499 740 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 GATA6Q92908 595 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MYLPFQ96A32 169 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TMEM176AQ96HP8 235 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 KLHL5Q96PQ7 755 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 PSMG3-AS1Q96PY0 264 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 SPAG5Q96R06 1193 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 SYT11Q9BT88 431 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 NUP58Q9BVL2 599 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 B3GNT5Q9BYG0 378 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ZNF518BQ9C0D4 1074 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 SNX25Q9H3E2 840 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ACP6Q9NPH0 428 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 ENTPD7Q9NQZ7 604 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 TMEM30AQ9NV96 361 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 PFDN2Q9UHV9 154 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 NOCTQ9UK39 431 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 GTF3C4Q9UKN8 822 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MYO6Q9UM54 1294 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 MTCH2Q9Y6C9 303 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 CDY1Q9Y6F8 540 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 VWA8A3KMH1 1905 aa5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 COL4A4P53420 1690 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-207ENST00000563781 A0A1W2PQH9 124 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 PER2O15055 1255 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 TGM5O43548 720 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 GFPT2O94808 682 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 ABLIM3O94929 683 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 SEC24AO95486 1093 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 BPNT1O95861 308 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 VDRP11473 427 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CCDC130P13994 396 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CHRNB2P17787 502 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 HNRNPH3P31942 346 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CASP14P31944 242 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 OR1D2P34982 312 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 ADMP35318 185 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 KRT9P35527 623 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 USP8P40818 1118 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 PRKCIP41743 596 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 STAT1P42224 750 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 MAGEA11P43364 429 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CLCN4P51793 760 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CDR1P51861 262 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 ADKP55263 362 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 ARPP19P56211 112 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 RBM10P98175 930 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 TSPY1Q01534 308 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CREMQ03060 361 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 CLCQ05315 142 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 HYAL1Q12794 435 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 KCNC3Q14003 757 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 MEA1Q16626 185 aa5.49□□□□□ -1.53
HERPUD1-207ENST00000563781 DUSP6Q16828 381 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms