RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 GRK7Q8WTQ7 553 aa22.74■■□□□ 1.23
LINC01960-201ENST00000563759 RUBCNQ92622 972 aa22.74■■□□□ 1.23
LINC01960-201ENST00000563759 P3H4Q92791 437 aa22.74■■□□□ 1.23
LINC01960-201ENST00000563759 ASB3Q9Y575 518 aa22.74■■□□□ 1.23
LINC01960-201ENST00000563759 H0YGN5 161 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 H3BNC9 293 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 EEF2KO00418 725 aaKnown RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 ECEL1O95672 775 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 MOCS2O96007 188 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 SLC2A3P11169 496 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 VSNL1P62760 191 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 RAB30Q15771 203 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 SNX30Q5VWJ9 437 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 JAMLQ86YT9 394 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 ELMOD1Q8N336 334 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 PQLC3Q8N755 202 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 TRIM51Q9BSJ1 452 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 FRMD8P1Q9BZ68 369 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 NKX2-4Q9H2Z4 354 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 ARGLU1Q9NWB6 273 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 DNPEPQ9ULA0 475 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 UTP11Q9Y3A2 253 aaKnown RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 TRANK1O15050 2925 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 DOCK6Q96HP0 2047 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 ZSCAN5CA6NGD5 496 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 APOEP02649 317 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 PECAM1P16284 738 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 TGM2P21980 687 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 PPP3CCP48454 512 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 TPI1P60174 286 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 TRIP4Q15650 581 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 HECTD3Q5T447 861 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 SLC9A4Q6AI14 798 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 PDE12Q6L8Q7 609 aaKnown RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 WDR93Q6P2C0 686 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 PLD5Q8N7P1 536 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 EPAS1Q99814 870 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 RAB17Q9H0T7 212 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 EPB41L5Q9HCM4 733 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 OR12D3Q9UGF7 316 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 FEZ2Q9UHY8 353 aaPredicted RBP22.73■■□□□ 1.23
LINC01960-201ENST00000563759 RAB21Q9UL25 225 aa22.73■■□□□ 1.23
LINC01960-201ENST00000563759 CDH23Q9H251 3354 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 SLC12A8A0AV02 714 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 FAM187AA6NFU0 413 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 MCF2LO15068 1137 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 DAPK3O43293 454 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 ZFXP17010 805 aaPredicted RBP22.72■■□□□ 1.23
LINC01960-201ENST00000563759 ATP5C1P36542 298 aaKnown RBP22.72■■□□□ 1.23
LINC01960-201ENST00000563759 PPP1R7Q15435 360 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 KCTD19Q17RG1 926 aaPredicted RBP22.72■■□□□ 1.23
LINC01960-201ENST00000563759 PPM1LQ5SGD2 360 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 RFX8Q6ZV50 586 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 IFT20Q8IY31 132 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 ARHGEF4Q9NR80 690 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 HEY1Q9Y5J3 304 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 DOCK4Q8N1I0 1966 aa22.72■■□□□ 1.23
LINC01960-201ENST00000563759 ESYT3A0FGR9 886 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 FAM72CH0Y354 149 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 PAGE1O75459 146 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 GAS8O95995 478 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 GGCXP38435 758 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 PTGIRP43119 386 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 VCPP55072 806 aaKnown RBP22.71■■□□□ 1.23
LINC01960-201ENST00000563759 SEMA3BQ13214 749 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 FAM72AQ5TYM5 149 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 FAM72DQ6L9T8 149 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 DRICH1Q6PGQ1 229 aaPredicted RBP22.71■■□□□ 1.23
LINC01960-201ENST00000563759 C1orf228Q6PIY5 440 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 NPNTQ6UXI9 565 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 FAM72BQ86X60 149 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ZNF276Q8N554 614 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ATL2Q8NHH9 583 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ANKRD7Q92527 254 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 SLCO2A1Q92959 643 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 SLC39A13Q96H72 371 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 FCRL2Q96LA5 508 aaPredicted RBP22.71■■□□□ 1.23
LINC01960-201ENST00000563759 HAPLN3Q96S86 360 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 SIK2Q9H0K1 926 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ZNF334Q9HCZ1 680 aaPredicted RBP22.71■■□□□ 1.23
LINC01960-201ENST00000563759 MAN1C1Q9NR34 630 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 DNMT3LQ9UJW3 386 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ZNF148Q9UQR1 794 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 PDE4DIPQ5VU43 2346 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 HMBSP08397 361 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 AMPD1P23109 780 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 TUBP50607 506 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 KPNA1P52294 538 aaPredicted RBP22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ZNF135P52742 658 aaPredicted RBP22.71■■□□□ 1.23
LINC01960-201ENST00000563759 LMNB2Q03252 620 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 GSTA5Q7RTV2 222 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 ARNTL2Q8WYA1 636 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 OSBPL2Q9H1P3 480 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 SNX10Q9Y5X0 201 aa22.71■■□□□ 1.23
LINC01960-201ENST00000563759 NUP205Q92621 2012 aa22.7■■□□□ 1.22
LINC01960-201ENST00000563759 KCNU1A8MYU2 1149 aa22.7■■□□□ 1.22
LINC01960-201ENST00000563759 EIF3EP60228 445 aaKnown RBP22.7■■□□□ 1.22
LINC01960-201ENST00000563759 NOMO1Q15155 1222 aa22.7■■□□□ 1.22
LINC01960-201ENST00000563759 FBXO38Q6PIJ6 1188 aa22.7■■□□□ 1.22
LINC01960-201ENST00000563759 SLC35B2Q8TB61 432 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms