RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CPB2Q96IY4 423 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 OLFM3Q96PB7 478 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 PGLYRP2Q96PD5 576 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 GMLQ99445 158 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 PCDH18Q9HCL0 1135 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 FIS1Q9Y3D6 152 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 SIN3BO75182 1162 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ERVK-10P10266 1014 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 RALBP11234 206 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 WASHC5Q12768 1159 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 MARK2Q7KZI7 788 aaKnown RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 CMC1Q7Z7K0 106 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 C1orf127Q8N9H9 656 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 CCDC106Q9BWC9 280 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 FAM192AQ9GZU8 254 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 DTNAQ9Y4J8 743 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 MAFBQ9Y5Q3 323 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 RBM47A0AV96 593 aaKnown RBP12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CAPN8A6NHC0 703 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 KLF11O14901 512 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 ITGBL1O95965 494 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-203ENST00000563623 NUDT2P50583 147 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 DLG1Q12959 904 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 EML3Q32P44 896 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 IYDQ6PHW0 289 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 ANKRD23Q86SG2 305 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 UBR7Q8N806 425 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 DNAAF3Q8N9W5 541 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 SCYL1Q96KG9 808 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 A0A088AWK7 358 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 USP12O75317 370 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 STAG3L1P0CL83 205 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 ADORA2BP29275 332 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CRHR1P34998 444 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 PHKA2P46019 1235 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 TBCCQ15814 346 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 FKBP1CQ5VVH2 108 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CMTM5Q96DZ9 223 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 LRGUKQ96M69 825 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 NDNQ99608 321 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 YIPF2Q9BWQ6 316 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF214Q9UL59 606 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-203ENST00000563623 AKT3Q9Y243 479 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 SNX9Q9Y5X1 595 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 GLRA3O75311 464 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 VDRP11473 427 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 ENO3P13929 434 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CDH5P33151 784 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CCNFP41002 786 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 MAGEA8P43361 318 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CNGA3Q16281 694 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 EFCAB12Q6NXP0 572 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 MTHFD1LQ6UB35 978 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 USP13Q92995 863 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CNBD2Q96M20 576 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 MAF1Q9H063 256 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 CDT1Q9H211 546 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 APPL1Q9UKG1 709 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 BLOC1S6Q9UL45 172 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 AK5Q9Y6K8 562 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 SLC4A7Q9Y6M7 1214 aa12.17□□□□□ -0.46
ABCA3-203ENST00000563623 OR6B1O95007 311 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MX2P20592 715 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 GPD2P43304 727 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 CDK7P50613 346 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 DEUP1Q05D60 604 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PDK3Q15120 406 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PHTF2Q8N3S3 785 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SREK1Q8WXA9 508 aaKnown RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MOCOSQ96EN8 888 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 HIC2Q96JB3 615 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 LGMNQ99538 433 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SPATA16Q9BXB7 569 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 FRMD8Q9BZ67 464 aaPredicted RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 QSER1Q2KHR3 1735 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 C2CD4BA6NLJ0 364 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SERPINE1P05121 402 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PDGFRBP09619 1106 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 VCLP18206 1134 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 ARL4AP40617 200 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PKNOX1P55347 436 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 PDK2Q15119 407 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 DCAF15Q66K64 600 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 DNAJC14Q6Y2X3 702 aaPredicted RBP12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SH2D5Q6ZV89 423 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 SULF1Q8IWU6 871 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 MCRS1Q96EZ8 462 aa12.16□□□□□ -0.46
ABCA3-203ENST00000563623 LPIN3Q9BQK8 851 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms