RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FDPSP14324 419 aaKnown RBP6.42□□□□□ -1.38
CLK3-212ENST00000563418 SNRPFP62306 86 aaKnown RBP6.42□□□□□ -1.38
CLK3-212ENST00000563418 FOXD4Q12950 439 aaPredicted RBP6.42□□□□□ -1.38
CLK3-212ENST00000563418 GALNTL6Q49A17 601 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 BRDTQ58F21 947 aaPredicted RBP6.42□□□□□ -1.38
CLK3-212ENST00000563418 TRABD2AQ86V40 505 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 COLGALT2Q8IYK4 626 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 ISOC1Q96CN7 298 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 KCTD14Q9BQ13 255 aaPredicted RBP6.42□□□□□ -1.38
CLK3-212ENST00000563418 AGXT2Q9BYV1 514 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 PIGUQ9H490 435 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 SERHLQ9NQF3 203 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 NUDT5Q9UKK9 219 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 CHKBQ9Y259 395 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 NDUFB9Q9Y6M9 179 aa6.42□□□□□ -1.38
CLK3-212ENST00000563418 DENND4BO75064 1496 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 KLRF2D3W0D1 207 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 AKR1B1P15121 316 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 RCVRNP35243 200 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CCDC58Q4VC31 144 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 SLC2A7Q6PXP3 512 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ZNF804AQ7Z570 1209 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CMTR1Q8N1G2 835 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 MPP5Q8N3R9 675 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TAB3Q8N5C8 712 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 NCANO14594 1321 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FAM20BO75063 409 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ADGRE1Q14246 886 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ZNF284Q2VY69 593 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ARHGAP17Q68EM7 881 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 HEATR6Q6AI08 1181 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 NSMFQ6X4W1 530 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 DPH6Q7L8W6 267 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CHSY1Q86X52 802 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 BBS7Q8IWZ6 715 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 OR8H3Q8N146 312 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TMEM35BQ8NCS4 154 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TBCKQ8TEA7 893 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 VCPIP1Q96JH7 1222 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 HEPHQ9BQS7 1158 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 GTPBP2Q9BX10 602 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 DGCR6LQ9BY27 220 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 KCND2Q9NZV8 630 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 VPS4BO75351 444 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 PEX14O75381 377 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TFRCP02786 760 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 CYP2D6P10635 497 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CD44P16070 742 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 MAGEA10P43363 369 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 ATP6V0D1P61421 351 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 HSF2Q03933 536 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 STYK1Q6J9G0 422 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TMC7Q7Z402 723 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TDRPQ86YL5 185 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 RBM15BQ8NDT2 890 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 RDM1Q8NG50 284 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TOP1MTQ969P6 601 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 OTUB1Q96FW1 271 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 RIC8BQ9NVN3 520 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 KCNE2Q9Y6J6 123 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 NEXMIFQ5QGS0 1516 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 C2orf74A8MZ97 194 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TRDMT1O14717 391 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 TIMM44O43615 452 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CHRNB1P11230 501 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FGFR2P21802 821 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CCNYL2Q5T2Q4 361 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 VANGL1Q8TAA9 524 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 NEK6Q9HC98 313 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 A2ML1A8K2U0 1454 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CCDC154A6NI56 674 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TFECO14948 347 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 UGT2B4P06133 528 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 POLBP06746 335 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 SLC9A1P19634 815 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ITGALP20701 1170 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 WARSP23381 471 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 TIE1P35590 1138 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 C2CD6Q53TS8 623 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 GSTCDQ8NEC7 633 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 TGFBRAP1Q8WUH2 860 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 BCL7BQ9BQE9 202 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 PLEKHA5Q9HAU0 1116 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.41□□□□□ -1.38
CLK3-212ENST00000563418 FBXO40Q9UH90 709 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ANKRD6Q9Y2G4 727 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ACEP12821 1306 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 BICRAQ9NZM4 1560 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 RGSL1A5PLK6 1076 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 I3L521 148 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 DYRK3O43781 588 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 KLK7P49862 253 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FASTKD1Q53R41 847 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 DCP2Q8IU60 420 aaKnown RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 FBXO36Q8NEA4 188 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 JPH3Q8WXH2 748 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 CHORDC1Q9UHD1 332 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 CDH9Q9ULB4 789 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms