RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 DCAF12L1Q5VU92 463 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 CACUL1Q86Y37 369 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 FMNL3Q8IVF7 1028 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 NAXDQ8IW45 347 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 TTC39CQ8N584 583 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 CADM4Q8NFZ8 388 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 DDI1Q8WTU0 396 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 UCMAQ8WVF2 138 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 PLD4Q96BZ4 506 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 CIPCQ9C0C6 399 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 DNAI2Q9GZS0 605 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 SFMBT1Q9UHJ3 866 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 TSPAN16Q9UKR8 245 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 STRIP2Q9ULQ0 834 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 NFE2L3Q9Y4A8 694 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 A0A1B0GTW7 788 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 METTL12A8MUP2 240 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 XPO1O14980 1071 aaKnown RBP17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 SYNCRIPO60506 623 aaKnown RBP17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 TSPAN3O60637 253 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 CYBBP04839 570 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 HLA-EP13747 358 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 EIF4HQ15056 248 aaKnown RBP17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 ZNF423Q2M1K9 1284 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 C1orf216Q8TAB5 229 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 PRCCQ92733 491 aaPredicted RBP17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 SLC2A11Q9BYW1 496 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 MIR1-1HGQ9H1L0 117 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 COQ4Q9Y3A0 265 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 SLCO1B1Q9Y6L6 691 aa17.56■□□□□ 0.4
HDGFL3-203ENST00000563404 YJEFN3A6XGL0 299 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 E7ENQ6 273 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 CETN3O15182 167 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 CBFA2T3O75081 653 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 GABBR2O75899 941 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 EPHX1P07099 455 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 EPB41P11171 864 aaKnown RBP17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 HOXB3P14651 431 aaPredicted RBP17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 HLA-FP30511 346 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 PRCPP42785 496 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 SGSHP51688 502 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 ADIGQ0VDE8 80 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 CUL2Q13617 745 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 HNRNPDQ14103 355 aaKnown RBP17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 ZC3H3Q8IXZ2 948 aaKnown RBP17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 UBR7Q8N806 425 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 PNPLA1Q8N8W4 532 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 EDEM1Q92611 657 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 GDPD2Q9HCC8 539 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 STOML2Q9UJZ1 356 aa17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 MUC22E2RYF6 1773 aaPredicted RBP17.55■□□□□ 0.4
HDGFL3-203ENST00000563404 CACNA1GO43497 2377 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 MSI1O43347 362 aaKnown RBP17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 STX10O60499 249 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 FTH1P19P0C7X4 201 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 OXTRP30559 389 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 PMS1P54277 932 aaKnown RBP17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 BCAT1P54687 386 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 BST2Q10589 180 aaKnown RBP17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 PNOCQ13519 176 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 BECN1Q14457 450 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 MPPE1Q53F39 396 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 DCAF17Q5H9S7 520 aaPredicted RBP17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 BSPRYQ5W0U4 402 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 SERPINA13PQ6UXR4 307 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 KIAA0907Q7Z7F0 614 aaPredicted RBP17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 SLCO6A1Q86UG4 719 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 FAM124AQ86V42 546 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 ZNF366Q8N895 744 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 CYB5D2Q8WUJ1 264 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 ADAMTS14Q8WXS8 1223 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 NUP58Q9BVL2 599 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 ZDHHC5Q9C0B5 715 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 TMEM245Q9H330 911 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 EIF2B4Q9UI10 523 aaKnown RBP17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 PCOLCE2Q9UKZ9 415 aa17.54■□□□□ 0.4
HDGFL3-203ENST00000563404 NBEAQ8NFP9 2946 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 O00370 1275 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 BCAT2O15382 392 aaPredicted RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 TIMM44O43615 452 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 C7P10643 843 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 SLC8A3P57103 927 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 CAMK2GQ13555 558 aaPredicted RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 PTPRNQ16849 979 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 PKDCCQ504Y2 493 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 TCERG1LQ5VWI1 586 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 ANKRD40Q6AI12 368 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 ADIPOR2Q86V24 386 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 OR2T3Q8NH03 318 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 WFDC5Q8TCV5 224 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 C6orf106Q9H6K1 298 aaPredicted RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 GAREM1Q9H706 876 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 LRRC4Q9HBW1 653 aa17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 FNDC3AQ9Y2H6 1198 aaKnown RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 HBS1LQ9Y450 684 aaKnown RBP17.53■□□□□ 0.4
HDGFL3-203ENST00000563404 PCDHB9Q9Y5E1 797 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms