RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 APBA1Q02410 837 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 MTA1Q13330 715 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 EIF4EBP2Q13542 120 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 KLHDC7AQ5VTJ3 777 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 BHMTQ93088 406 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 FAM149B1Q96BN6 582 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 TMA16Q96EY4 203 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 NOX5Q96PH1 765 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 RTKNQ9BST9 563 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 NAA15Q9BXJ9 866 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 TPSD1Q9BZJ3 242 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 MIS12Q9H081 205 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 ARRDC1-AS1Q9H2J1 176 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 PLCB1Q9NQ66 1216 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 SAMSN1Q9NSI8 373 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 TMEM51Q9NW97 253 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 ELOVL2Q9NXB9 296 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 BCCIPQ9P287 314 aaKnown RBP eCLIP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 CDV3Q9UKY7 258 aaKnown RBP12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 MYH10P35580 1976 aa12.72□□□□□ -0.37
NSMCE1-204ENST00000563273 CACNA1AO00555 2505 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 FOXN3O00409 490 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 PIK3R2O00459 728 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 GABRG2P18507 467 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 CLCN1P35523 988 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 KRT9P35527 623 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 MPLP40238 635 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 USP8P40818 1118 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 KCNMA1Q12791 1236 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 GEN1Q17RS7 908 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 FAM133BQ5BKY9 247 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 EFHC1Q5JVL4 640 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 METTL3Q86U44 580 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 WDTC1Q8N5D0 677 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 IPO4Q8TEX9 1081 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 FCRL2Q96LA5 508 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 SLC2A13Q96QE2 648 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 ACOX2Q99424 681 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 ACP6Q9NPH0 428 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 ANO10Q9NW15 660 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 AJAP1Q9UKB5 411 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 NAALADL1Q9UQQ1 740 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 CEP83Q9Y592 693 aa12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-204ENST00000563273 CEP250Q9BV73 2442 aa12.71□□□□□ -0.38
NSMCE1-204ENST00000563273 CAPN9O14815 690 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 SLC30A4O14863 429 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 DCLK1O15075 740 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 HSF2BPO75031 334 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 TPM2P07951 284 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 SLC2A3P11169 496 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 UCHL3P15374 230 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 GBP1P32455 592 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 HOXD12P35452 270 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 SCNN1AP37088 669 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 STARD3Q14849 445 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 SYPL2Q5VXT5 272 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 DGLUCYQ7Z3D6 616 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 TAC4Q86UU9 113 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 SLC47A2Q86VL8 602 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 AHI1Q8N157 1196 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 HJURPQ8NCD3 748 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 C1orf131Q8NDD1 294 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 ZNF397Q8NF99 534 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 CPXM1Q96SM3 734 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 ZDHHC4Q9NPG8 344 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 CACNA2D2Q9NY47 1150 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 CALCOCO1Q9P1Z2 691 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 CLEC4EQ9ULY5 219 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 STON1Q9Y6Q2 735 aa12.7□□□□□ -0.38
NSMCE1-204ENST00000563273 TYW5A2RUC4 315 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 LSM8O95777 96 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 CAVIN2O95810 425 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 APOEP02649 317 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 NDUFV2P19404 249 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 BCKDHBP21953 392 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 HLA-FP30511 346 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 CDK17Q00537 523 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 ZNF234Q14588 700 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 STX1AQ16623 288 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 CCDC183Q5T5S1 534 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
NSMCE1-204ENST00000563273 NADSYN1Q6IA69 706 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms