RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 IRX2Q9BZI1 471 aaPredicted RBP17.55■□□□□ 0.4
CLK3-210ENST00000563112 STON1Q9Y6Q2 735 aa17.55■□□□□ 0.4
CLK3-210ENST00000563112 SPTBN2O15020 2390 aa17.55■□□□□ 0.4
CLK3-210ENST00000563112 DCHS1Q96JQ0 3298 aa17.55■□□□□ 0.4
CLK3-210ENST00000563112 DCDC2BA2VCK2 349 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 LIMK1P53667 647 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 PTK2Q05397 1052 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 SPDYCQ5MJ68 293 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 DDX1Q92499 740 aaKnown RBP17.54■□□□□ 0.4
CLK3-210ENST00000563112 SHC3Q92529 594 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 AZIN2Q96A70 460 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 TUBGCP2Q9BSJ2 902 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 SLC4A5Q9BY07 1137 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 CIPCQ9C0C6 399 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 NDST4Q9H3R1 872 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 SMOC1Q9H4F8 434 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 ELOVL2Q9NXB9 296 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 CALCOCO1Q9P1Z2 691 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 THAP10Q9P2Z0 257 aaPredicted RBP17.54■□□□□ 0.4
CLK3-210ENST00000563112 RAD54BQ9Y620 910 aa17.54■□□□□ 0.4
CLK3-210ENST00000563112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 WASH3PC4AMC7 463 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 PES1O00541 588 aaKnown RBP17.53■□□□□ 0.4
CLK3-210ENST00000563112 IRAK2O43187 625 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 AP5Z1O43299 807 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 ACSL4O60488 711 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 DPP6P42658 865 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 VWA3BQ502W6 1294 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 KIAA1211LQ6NV74 962 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 BEND5Q7L4P6 421 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 TMEM110Q86TL2 294 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 TMEFF1Q8IYR6 380 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 ZNF557Q8N988 423 aaPredicted RBP17.53■□□□□ 0.4
CLK3-210ENST00000563112 DQX1Q8TE96 717 aaKnown RBP17.53■□□□□ 0.4
CLK3-210ENST00000563112 WFIKKN2Q8TEU8 576 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 PIGKQ92643 395 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 NOX5Q96PH1 765 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 MBD1Q9UIS9 605 aaPredicted RBP17.53■□□□□ 0.4
CLK3-210ENST00000563112 DNAJC12Q9UKB3 198 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 CLEC4EQ9ULY5 219 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 NAALADL1Q9UQQ1 740 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 NUP205Q92621 2012 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 NCOR2Q9Y618 2525 aa17.53■□□□□ 0.4
CLK3-210ENST00000563112 TYW5A2RUC4 315 aaKnown RBP17.52■□□□□ 0.4
CLK3-210ENST00000563112 BECN2A8MW95 431 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 E5RJQ4 531 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 KHNYNO15037 678 aaKnown RBP17.52■□□□□ 0.4
CLK3-210ENST00000563112 SYNCRIPO60506 623 aaKnown RBP17.52■□□□□ 0.4
CLK3-210ENST00000563112 IGLV3-27P01718 113 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 NDUFV2P19404 249 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 HOXD9P28356 352 aaPredicted RBP17.52■□□□□ 0.4
CLK3-210ENST00000563112 SNX16P57768 344 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 APBA1Q02410 837 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 NNTQ13423 1086 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 MPP7Q5T2T1 576 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 CCDC117Q8IWD4 279 aaPredicted RBP17.52■□□□□ 0.4
CLK3-210ENST00000563112 FRMD1Q8N878 549 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 ERLEC1Q96DZ1 483 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 POPDC2Q9HBU9 364 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 ACP6Q9NPH0 428 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 TLR6Q9Y2C9 796 aa17.52■□□□□ 0.4
CLK3-210ENST00000563112 GON4LQ3T8J9 2241 aa17.52■□□□□ 0.39
CLK3-210ENST00000563112 PLXND1Q9Y4D7 1925 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 CNOT1A5YKK6 2376 aaKnown RBP17.51■□□□□ 0.39
CLK3-210ENST00000563112 MED19A0JLT2 244 aaPredicted RBP17.51■□□□□ 0.39
CLK3-210ENST00000563112 KCNJ18B7U540 433 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 GOLGA6L22H0YM25 854 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 PAPSS1O43252 624 aaPredicted RBP17.51■□□□□ 0.39
CLK3-210ENST00000563112 TBL1XO60907 577 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 FYNP06241 537 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 KRT9P35527 623 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 IL12RB1P42701 662 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 BPIFB4P59827 614 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 YWHAZP63104 245 aaKnown RBP17.51■□□□□ 0.39
CLK3-210ENST00000563112 RPL6Q02878 288 aaKnown RBP17.51■□□□□ 0.39
CLK3-210ENST00000563112 PDCLQ13371 301 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 KCNJ12Q14500 433 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 ZNF234Q14588 700 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 HSP90AA4PQ58FG1 418 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 PIK3R6Q5UE93 754 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 LYSMD4Q5XG99 296 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 RNF43Q68DV7 783 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 TCEAL6Q6IPX3 200 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 KIAA1324Q6UXG2 1013 aaKnown RBP17.51■□□□□ 0.39
CLK3-210ENST00000563112 ARMCX6Q7L4S7 300 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 TCEAL3Q969E4 200 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 CD248Q9HCU0 757 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 SIX2Q9NPC8 291 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 CYTH4Q9UIA0 394 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 PCDHGC3Q9UN70 934 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 CYP8B1Q9UNU6 501 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 PLA2G4CQ9UP65 541 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 CEP83Q9Y592 693 aa17.51■□□□□ 0.39
CLK3-210ENST00000563112 GOLGA6L7A0A1B0GV03 622 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
CLK3-210ENST00000563112 NDUFS2O75306 463 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 APOEP02649 317 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms