RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 EDEM1Q92611 657 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 GOLGA1Q92805 767 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 KAT5Q92993 513 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 TMA16Q96EY4 203 aaKnown RBP13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 ZNF419Q96HQ0 510 aaPredicted RBP13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 ZSWIM1Q9BR11 485 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 SFMBT1Q9UHJ3 866 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 CYP8B1Q9UNU6 501 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 CTNND2Q9UQB3 1225 aa13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
AC009055.1-201ENST00000562656 WASH3PC4AMC7 463 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 M0QYV0 167 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 SART1O43290 800 aaKnown RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 SYNCRIPO60506 623 aaKnown RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 GADD45BO75293 160 aaPredicted RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 NDUFS2O75306 463 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 GABBR2O75899 941 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 IGLV3-27P01718 113 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 LTFP02788 710 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 SERPINF2P08697 491 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 C7P10643 843 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 ENGP17813 658 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 KCNA4P22459 653 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 HOXD9P28356 352 aaPredicted RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 IL12RB1P42701 662 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 NOVA1P51513 510 aaKnown RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 ZNF234Q14588 700 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 NUGGCQ68CJ6 796 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 PSAPL1Q6NUJ1 521 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 BEND5Q7L4P6 421 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 WFIKKN2Q8TEU8 576 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 PRDM16Q9HAZ2 1276 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 ITM2CQ9NQX7 267 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 USP36Q9P275 1121 aaKnown RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 NFE2L3Q9Y4A8 694 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 TPRP12270 2363 aaKnown RBP13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 CKAP5Q14008 2032 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
AC009055.1-201ENST00000562656 UPK3BL1B0FP48 263 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 UPK3BL2E5RIL1 263 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 BIN1O00499 593 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 IRAK2O43187 625 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 IGLV3-19P01714 112 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 NCAM1P13591 858 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 CD6P30203 668 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 OXTRP30559 389 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 GPD2P43304 727 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 ACADSBP45954 432 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 SLC11A2P49281 568 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 RGS7P49802 495 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 STX17P56962 302 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 ARID5AQ03989 594 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 GFPT1Q06210 699 aaPredicted RBP13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 NNTQ13423 1086 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 SYCP2LQ5T4T6 812 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 TMEM215Q68D42 235 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 KIAA1324Q6UXG2 1013 aaKnown RBP13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 ENOSF1Q7L5Y1 443 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 KIAA0907Q7Z7F0 614 aaPredicted RBP13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 SLC41A1Q8IVJ1 513 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 STK32AQ8WU08 396 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 TRIM62Q9BVG3 475 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 CIPCQ9C0C6 399 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 INTS2Q9H0H0 1204 aaKnown RBP13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 CAPN10Q9HC96 672 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 SUSD2Q9UGT4 822 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 ACACBO00763 2458 aa13.65□□□□□ -0.22
AC009055.1-201ENST00000562656 MSI1O43347 362 aaKnown RBP13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 MED7O43513 233 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 CFIP05156 583 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 SYPP08247 313 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 HLA-FP30511 346 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 ATXN3P54252 364 aaPredicted RBP13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 UBE2HP62256 183 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 WDR45BQ5MNZ6 344 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 SH3PXD2AQ5TCZ1 1133 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 SERPINA13PQ6UXR4 307 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 TMPRSS6Q8IU80 811 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 AHI1Q8N157 1196 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 CADM4Q8NFZ8 388 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 PRCCQ92733 491 aaPredicted RBP13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 SIPA1Q96FS4 1042 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 HSPA12BQ96MM6 686 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 SERPINB11Q96P15 392 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 DDX50Q9BQ39 737 aaKnown RBP13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 MKRN2Q9H000 416 aaKnown RBP13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 SLC6A17Q9H1V8 727 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 WSB2Q9NYS7 404 aaPredicted RBP13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
AC009055.1-201ENST00000562656 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms