RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 NUMA1Q14980 2115 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 PYCARD-AS1I3L0S3 204 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 VILLO15195 856 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 CLIC2O15247 247 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 ARHGAP6O43182 974 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 TRIM21P19474 475 aaKnown RBP19.3■□□□□ 0.68
KATNB1-202ENST00000562542 RACK1P63244 317 aaKnown RBP19.3■□□□□ 0.68
KATNB1-202ENST00000562542 COG7P83436 770 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 TMEM215Q68D42 235 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 FBXL19Q6PCT2 694 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 DENND1CQ8IV53 801 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 C12orf29Q8N999 325 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 XXYLT1Q8NBI6 393 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 CYB5D2Q8WUJ1 264 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 NAF1Q96HR8 494 aaKnown RBP19.3■□□□□ 0.68
KATNB1-202ENST00000562542 SLC6A18Q96N87 628 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 SLC2A11Q9BYW1 496 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 SGK2Q9HBY8 427 aa19.3■□□□□ 0.68
KATNB1-202ENST00000562542 AGO1Q9UL18 857 aaKnown RBP19.3■□□□□ 0.68
KATNB1-202ENST00000562542 COL5A1P20908 1838 aaPredicted RBP19.3■□□□□ 0.68
KATNB1-202ENST00000562542 P4HA1P13674 534 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 HOXD13P35453 343 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 NDST1P52848 882 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 RPS14P62263 151 aaKnown RBP19.29■□□□□ 0.68
KATNB1-202ENST00000562542 KCNC4Q03721 635 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 ZBTB16Q05516 673 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 EFEMP1Q12805 493 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 KCNH2Q12809 1159 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 NCOA4Q13772 614 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 KIAA0895LQ68EN5 471 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 FAM181AQ8N9Y4 354 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 RBBP8NLQ8NC74 664 aaPredicted RBP19.29■□□□□ 0.68
KATNB1-202ENST00000562542 CDK5RAP1Q96SZ6 601 aaKnown RBP19.29■□□□□ 0.68
KATNB1-202ENST00000562542 VRTNQ9H8Y1 702 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 AASDHPPTQ9NRN7 309 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 HMGXB4Q9UGU5 601 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 FBXO2Q9UK22 296 aaPredicted RBP19.29■□□□□ 0.68
KATNB1-202ENST00000562542 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 HECTD1Q9ULT8 2610 aa19.29■□□□□ 0.68
KATNB1-202ENST00000562542 MGAQ8IWI9 3026 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 KIF20AO95235 890 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 GLDCP23378 1020 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 CASP4P49662 377 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 PSEN1P49768 467 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 RHDQ02161 417 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 BMT2Q1RMZ1 405 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 TBC1D25Q3MII6 688 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 BROXQ5VW32 411 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 CLEC20AQ6ZU45 233 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 NELFCDQ8IXH7 590 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 SAP25Q8TEE9 199 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 TMEM245Q9H330 911 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 FBRSQ9HAH7 460 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 SMC3Q9UQE7 1217 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 NCKAP1Q9Y2A7 1128 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 SRPRBQ9Y5M8 271 aaKnown RBP19.28■□□□□ 0.68
KATNB1-202ENST00000562542 ATMQ13315 3056 aa19.28■□□□□ 0.68
KATNB1-202ENST00000562542 HHLA1C9JL84 531 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 EIF3DO15371 548 aaKnown RBP eCLIP19.27■□□□□ 0.68
KATNB1-202ENST00000562542 YKT6O15498 198 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 TGFB1I1O43294 461 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 IGHV4-34P06331 123 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 ARRB1P49407 418 aaPredicted RBP19.27■□□□□ 0.68
KATNB1-202ENST00000562542 SCD5Q86SK9 330 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 ERICH1Q86X53 443 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 FMNL3Q8IVF7 1028 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 CRYBG2Q8N1P7 616 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 ORAI3Q9BRQ5 295 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 GDF3Q9NR23 364 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 CLCA2Q9UQC9 943 aa19.27■□□□□ 0.68
KATNB1-202ENST00000562542 A0A1W2PPC4 97 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 TMPRSS3P57727 454 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 ARHGAP40Q5TG30 622 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 ZNF776Q68DI1 518 aaPredicted RBP19.26■□□□□ 0.67
KATNB1-202ENST00000562542 CHST9Q7L1S5 443 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 RSRC2Q7L4I2 434 aaKnown RBP19.26■□□□□ 0.67
KATNB1-202ENST00000562542 CPXM2Q8N436 756 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 PDILTQ8N807 584 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 ZNF248Q8NDW4 579 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 GOLGA1Q92805 767 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 TMX3Q96JJ7 454 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 GZF1Q9H116 711 aaPredicted RBP19.26■□□□□ 0.67
KATNB1-202ENST00000562542 PRSS16Q9NQE7 514 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 STRIP2Q9ULQ0 834 aa19.26■□□□□ 0.67
KATNB1-202ENST00000562542 SLC12A8A0AV02 714 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 STX6O43752 255 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 EXOC3O60645 756 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 EPHA8P29322 1005 aaPredicted RBP19.25■□□□□ 0.67
KATNB1-202ENST00000562542 CEBPZQ03701 1054 aaKnown RBP19.25■□□□□ 0.67
KATNB1-202ENST00000562542 ILKQ13418 452 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 SHBQ15464 509 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 CCDC186Q7Z3E2 898 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 UNC93AQ86WB7 457 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 ZNF507Q8TCN5 953 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 WFIKKN2Q8TEU8 576 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 TSC1Q92574 1164 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 WBP1Q96G27 269 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 HNRNPABQ99729 332 aaKnown RBP19.25■□□□□ 0.67
KATNB1-202ENST00000562542 CPNE5Q9HCH3 593 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms