RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SULT1E1P49888 294 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 SLC25A52Q3SY17 297 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 FBXO43Q4G163 708 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
CLK3-207ENST00000562389 FYB2Q5VWT5 728 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 TRNP1Q6NT89 227 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 BNIPLQ7Z465 357 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 VPS36Q86VN1 386 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 DRC7Q8IY82 874 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 PHTF2Q8N3S3 785 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 XPO6Q96QU8 1125 aaKnown RBP17.37■□□□□ 0.37
CLK3-207ENST00000562389 PNKPQ96T60 521 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 DNAJC7Q99615 494 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 PRRX2Q99811 253 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 ADAM33Q9BZ11 813 aa17.37■□□□□ 0.37
CLK3-207ENST00000562389 RBM12Q9NTZ6 932 aaKnown RBP17.37■□□□□ 0.37
CLK3-207ENST00000562389 SYNJ2BP-COX16A0A087WUM0 186 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 KCNU1A8MYU2 1149 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 GALR2O43603 387 aaPredicted RBP17.36■□□□□ 0.37
CLK3-207ENST00000562389 TULP3O75386 442 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 CYBBP04839 570 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 CCR1P32246 355 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 SLC6A11P48066 632 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 NME3Q13232 169 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 MTA1Q13330 715 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 PPP2R5DQ14738 602 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 PREPLQ4J6C6 727 aaPredicted RBP17.36■□□□□ 0.37
CLK3-207ENST00000562389 MPPE1Q53F39 396 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 FAM133BQ5BKY9 247 aaKnown RBP17.36■□□□□ 0.37
CLK3-207ENST00000562389 NADSYN1Q6IA69 706 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 PHLDB2Q86SQ0 1253 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 NAT16Q8N8M0 369 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 ATP6V0D2Q8N8Y2 350 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 OR8K1Q8NGG5 319 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 EZH1Q92800 747 aaPredicted RBP17.36■□□□□ 0.37
CLK3-207ENST00000562389 P2RY11Q96G91 374 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 BTN2A3PQ96KV6 586 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 TBCBQ99426 244 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 DDX50Q9BQ39 737 aaKnown RBP17.36■□□□□ 0.37
CLK3-207ENST00000562389 SELENOOQ9BVL4 669 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 COX16Q9P0S2 106 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 CALCOCO1Q9P1Z2 691 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 FBXO10Q9UK96 956 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 HCN4Q9Y3Q4 1203 aa17.36■□□□□ 0.37
CLK3-207ENST00000562389 A0A0A0MRY4 1105 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 C2CD4BA6NLJ0 364 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 SIGLEC16A6NMB1 481 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 TMCO5BA8MYB1 307 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 MFAP3LO75121 409 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 RTN2O75298 545 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 MOCS2O96007 188 aaPredicted RBP17.35■□□□□ 0.37
CLK3-207ENST00000562389 F9P00740 461 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 APODP05090 189 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 PLEKP08567 350 aaPredicted RBP17.35■□□□□ 0.37
CLK3-207ENST00000562389 KRT3P12035 628 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 TFE3P19532 575 aaPredicted RBP17.35■□□□□ 0.37
CLK3-207ENST00000562389 ABCB4P21439 1286 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 SLC6A4P31645 630 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 GRIA2P42262 883 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 ZNF75DP51815 510 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 TBX2Q13207 712 aaPredicted RBP17.35■□□□□ 0.37
CLK3-207ENST00000562389 DNAJC24Q6P3W2 148 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 EMC1Q8N766 993 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 JOSD2Q8TAC2 188 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 RNF34Q969K3 372 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 CFAP57Q96MR6 1250 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 ISCUQ9H1K1 167 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 ARHGEF4Q9NR80 690 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 PIGVQ9NUD9 493 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 ABHD10Q9NUJ1 306 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 DNAJC17Q9NVM6 304 aaKnown RBP17.35■□□□□ 0.37
CLK3-207ENST00000562389 PLK2Q9NYY3 685 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 ARHGAP20Q9P2F6 1191 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 DEC1Q9P2X7 70 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 ADAMTS1Q9UHI8 967 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 SLC12A6Q9UHW9 1150 aa17.35■□□□□ 0.37
CLK3-207ENST00000562389 GOLGA6L7A0A1B0GV03 622 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 KAT7O95251 611 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 GJB6O95452 261 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 FTLP02792 175 aaPredicted RBP17.34■□□□□ 0.37
CLK3-207ENST00000562389 PDGFRAP16234 1089 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 RRM1P23921 792 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 HOXD9P28356 352 aaPredicted RBP17.34■□□□□ 0.37
CLK3-207ENST00000562389 RDXP35241 583 aaKnown RBP17.34■□□□□ 0.37
CLK3-207ENST00000562389 PTPN9P43378 593 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 CXCR3P49682 368 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 DEUP1Q05D60 604 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 KDSRQ06136 332 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 MESP2Q0VG99 397 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 BRMS1LQ5PSV4 323 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 PPP1R15BQ5SWA1 713 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 PIK3R6Q5UE93 754 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 RNF43Q68DV7 783 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 GRAMD4Q6IC98 578 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 WDR59Q6PJI9 974 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 Q6ZS52 159 aa17.34■□□□□ 0.37
CLK3-207ENST00000562389 SND1Q7KZF4 910 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms