RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 GKN1Q9NS71 199 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 STAP1Q9ULZ2 295 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 CPQQ9Y646 472 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 COL4A3Q01955 1670 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 RIOK3O14730 519 aaKnown RBP23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 CAPN9O14815 690 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 ZNF185O15231 689 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 FYNP06241 537 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 MBL2P11226 248 aaPredicted RBP23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 NOS2P35228 1153 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 MARCKSL1P49006 195 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 TAS2R40P59535 323 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 HADHQ16836 314 aaKnown RBP23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 CREG2Q8IUH2 290 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 CAPZA3Q96KX2 299 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 CLIC5Q9NZA1 410 aa23.34■■□□□ 1.33
SYNGR3-202ENST00000562045 SCAMP3O14828 347 aaKnown RBP23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 SLC7A9P82251 487 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 CKAP4Q07065 602 aaKnown RBP23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 TDGQ13569 410 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 C15orf59Q2T9L4 293 aaPredicted RBP23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 DCAF6Q58WW2 860 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 IER5LQ5T953 404 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 CCDC181Q5TID7 509 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 POLNQ7Z5Q5 900 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 ARFGAP1Q8N6T3 406 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 CEP112Q8N8E3 955 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 SH3RF2Q8TEC5 729 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 ZFYVE19Q96K21 471 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 ZMYM5Q9UJ78 669 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 ARHGAP26Q9UNA1 814 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 SORCS3Q9UPU3 1222 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 TICRRQ7Z2Z1 1910 aa23.33■■□□□ 1.33
SYNGR3-202ENST00000562045 COL4A2P08572 1712 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 PSEN1P49768 467 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 ATP11AP98196 1134 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 ZNF77Q15935 545 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 CDO1Q16878 200 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 SLC25A52Q3SY17 297 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 C10orf120Q5SQS8 335 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 BEND5Q7L4P6 421 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 MFSD6LQ8IWD5 586 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 CELF5Q8N6W0 485 aaKnown RBP23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 FAM172AQ8WUF8 416 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 NXPE3Q969Y0 559 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 ASIC4Q96FT7 647 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 RRN3Q9NYV6 651 aa23.33■■□□□ 1.32
SYNGR3-202ENST00000562045 LEFTY2O00292 366 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 KRT7P08729 469 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 PFKLP17858 780 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 PAFAH1B1P43034 410 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 DCAF12L1Q5VU92 463 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 BTBD8Q5XKL5 378 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 STRADAQ7RTN6 431 aa23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 CENPIQ92674 756 aaPredicted RBP23.32■■□□□ 1.32
SYNGR3-202ENST00000562045 CEP104O60308 925 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 NCAM1P13591 858 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 PSMC3P17980 439 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 MIPP30301 263 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 ATP5C1P36542 298 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 SLC25A11Q02978 314 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 USP4Q13107 963 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 MIB1Q86YT6 1006 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 KATNAL2Q8IYT4 538 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 ARHGAP18Q8N392 663 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 BPIFB1Q8TDL5 484 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 NT5C3BQ969T7 300 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 CARD6Q9BX69 1037 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 KLF16Q9BXK1 252 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 ABCC13Q9NSE7 274 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 USP18Q9UMW8 372 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 NAALADL1Q9UQQ1 740 aa23.31■■□□□ 1.32
SYNGR3-202ENST00000562045 SLU7O95391 586 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 RALAP11233 206 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 TCF4P15884 667 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 GJC1P36383 396 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 SULT1E1P49888 294 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 FCHO2Q0JRZ9 810 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 EFEMP1Q12805 493 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 SH3PXD2AQ5TCZ1 1133 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 SEL1L2Q5TEA6 688 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 SYPL2Q5VXT5 272 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 RASGEF1CQ8N431 466 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 MNS1Q8NEH6 495 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 ACTRT1Q8TDG2 376 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 NPY6RQ99463 290 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 NACA2Q9H009 215 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 OBP2AQ9NY56 170 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 DDX56Q9NY93 547 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 SFMBT1Q9UHJ3 866 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 DUSP12Q9UNI6 340 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 PRPSAP2O60256 369 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 GDI1P31150 447 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 ZNF276Q8N554 614 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 TBCBQ99426 244 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 CFAP97Q9P2B7 532 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 RASAL2Q9UJF2 1139 aa23.3■■□□□ 1.32
SYNGR3-202ENST00000562045 GREM1O60565 184 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 IRF1P10914 325 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 HDAC4P56524 1084 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms