RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 RANBP1P43487 201 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 AUHQ13825 339 aaKnown RBP10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 FASTKD3Q14CZ7 662 aaKnown RBP10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 MORF4L2Q15014 288 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 KRT71Q3SY84 523 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 ODF2Q5BJF6 829 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 PM20D1Q6GTS8 502 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 MFSD5Q6N075 450 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 C1orf228Q6PIY5 440 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 LRRC8DQ7L1W4 858 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCDC25Q86WR0 208 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 FAM131BQ86XD5 332 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 FAM71DQ8N9W8 422 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 EPS8L3Q8TE67 593 aaKnown RBP10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 MED10Q9BTT4 135 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 FOXP3Q9BZS1 431 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 NRDE2Q9H7Z3 1164 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 PIGVQ9NUD9 493 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 TBC1D13Q9NVG8 400 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 PCDHB8Q9UN66 801 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 SHOC2Q9UQ13 582 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 NAALADL1Q9UQQ1 740 aa10.59□□□□□ -0.71
TUBGCP4-202ENST00000561691 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SGK1O00141 431 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ENPP3O14638 875 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SMIM24O75264 130 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 FBXO21O94952 628 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 NQO1P15559 274 aaKnown RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 CYP2F1P24903 491 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SULT1E1P49888 294 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 PPP2R2AP63151 447 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 IFI35P80217 286 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 GBE1Q04446 702 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SEMA3BQ13214 749 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 EIF4EBP2Q13542 120 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 CUL3Q13618 768 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 KRT81Q14533 505 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ITIH4Q14624 930 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 LBRQ14739 615 aaKnown RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 PLEKHG4Q58EX7 1191 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 CMPK2Q5EBM0 449 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 NOMO2Q5JPE7 1267 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ANKRD20A2Q5SQ80 823 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ANKRD20A1Q5TYW2 823 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ANKRD20A3Q5VUR7 823 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 NUGGCQ68CJ6 796 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 NCBP2-AS2Q69YL0 99 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SCML4Q8N228 414 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 CCDC197Q8NCU1 140 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 PGAP3Q96FM1 320 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SMARCD1Q96GM5 515 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 OLFM3Q96PB7 478 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 DNAI2Q9GZS0 605 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 SUDS3Q9H7L9 328 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 POPDC2Q9HBU9 364 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 LRRC4Q9HBW1 653 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 CNGB3Q9NQW8 809 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 DNAJB4Q9UDY4 337 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 BLOC1S6Q9UL45 172 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ZMYND8Q9ULU4 1186 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 NOVA2Q9UNW9 492 aaKnown RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 BCLAF3A2AJT9 711 aaKnown RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 E7ESA3 106 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 TNFRSF10BO14763 440 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 APOL1O14791 398 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 MCF2LO15068 1137 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ALOX15BO15296 676 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 MAP3K13O43283 966 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ACSL3O95573 720 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 IFNB1P01574 187 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 GCAP28676 217 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ALDH3A1P30838 453 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 MAGEA4P43358 317 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 PGFP49763 221 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ROR1Q01973 937 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 MTFR1Q15390 333 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 DCAF6Q58WW2 860 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 OVOS1Q6IE37 1185 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 PSTKQ8IV42 348 aaKnown RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 MAP7D3Q8IWC1 876 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 AGGF1Q8N302 714 aaeCLIP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 LRRN4Q8WUT4 740 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 FAM149B1Q96BN6 582 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 VWCEQ96DN2 955 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 DTNBP1Q96EV8 351 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 C9orf72Q96LT7 481 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 RBM15Q96T37 977 aaKnown RBP eCLIP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 FAM167BQ9BTA0 163 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 DHX35Q9H5Z1 703 aaKnown RBP10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 DSEQ9UL01 958 aa10.58□□□□□ -0.72
TUBGCP4-202ENST00000561691 GOLGA6L10A6NI86 522 aa10.57□□□□□ -0.72
TUBGCP4-202ENST00000561691 FAM72CH0Y354 149 aa10.57□□□□□ -0.72
TUBGCP4-202ENST00000561691 BANF1O75531 89 aa10.57□□□□□ -0.72
TUBGCP4-202ENST00000561691 DGKIO75912 1065 aa10.57□□□□□ -0.72
TUBGCP4-202ENST00000561691 OAZ2O95190 189 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms