RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IGHV1OR15-9A0A0B4J2B8 117 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 GOLGA6L7A0A1B0GV03 622 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 LNP1A1A4G5 178 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 KHNYNO15037 678 aaKnown RBP10.72□□□□□ -0.69
CLK3-205ENST00000561673 NPC1O15118 1278 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 LETM1O95202 739 aaPredicted RBP10.72□□□□□ -0.69
CLK3-205ENST00000561673 LATS1O95835 1130 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 IGLV3-27P01718 113 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 NCAM1P13591 858 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 IL12RB1P42701 662 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 SGSHP51688 502 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 IRX4P78413 519 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 RPL6Q02878 288 aaKnown RBP10.72□□□□□ -0.69
CLK3-205ENST00000561673 ENPP2Q13822 863 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 MPPE1Q53F39 396 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 RNF43Q68DV7 783 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 TRIM65Q6PJ69 517 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 SLC36A4Q6YBV0 504 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 ENOSF1Q7L5Y1 443 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 UNC45BQ8IWX7 931 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 UCMAQ8WVF2 138 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 ZNF606Q8WXB4 792 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 SORCS1Q8WY21 1168 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 DDX1Q92499 740 aaKnown RBP10.72□□□□□ -0.69
CLK3-205ENST00000561673 GOLGA1Q92805 767 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
CLK3-205ENST00000561673 MRGPRX1Q96LB2 322 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 EDEM2Q9BV94 578 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 LSM14BQ9BX40 385 aaKnown RBP10.72□□□□□ -0.69
CLK3-205ENST00000561673 CLSTN2Q9H4D0 955 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 ST7Q9NRC1 585 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 CYTH4Q9UIA0 394 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 CYP8B1Q9UNU6 501 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 SPAG17Q6Q759 2223 aa10.72□□□□□ -0.69
CLK3-205ENST00000561673 C4orf47A7E2U8 309 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 BECN2A8MW95 431 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 CDX4O14627 284 aaPredicted RBP10.71□□□□□ -0.69
CLK3-205ENST00000561673 AP5Z1O43299 807 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 MED7O43513 233 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 TIMM44O43615 452 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ZNF217O75362 1048 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ADRB1P08588 477 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ITPKAP23677 461 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 PON1P27169 355 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 HLA-FP30511 346 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 GNA15P30679 374 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ACADSBP45954 432 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 SLC11A2P49281 568 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 TBX4P57082 545 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ZNF445P59923 1031 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ZNF234Q14588 700 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 ARHGAP44Q17R89 818 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 EXOC3L4Q17RC7 722 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 FUT11Q495W5 492 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 FAM133BQ5BKY9 247 aaKnown RBP10.71□□□□□ -0.69
CLK3-205ENST00000561673 TRIM61Q5EBN2 209 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 PIK3R6Q5UE93 754 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 LYSMD4Q5XG99 296 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 RALGAPA1Q6GYQ0 2036 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 RFWD3Q6PCD5 774 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 GBP6Q6ZN66 633 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 TMEM110Q86TL2 294 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 SYT12Q8IV01 421 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 STK32AQ8WU08 396 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 SLC4A5Q9BY07 1137 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 CIPCQ9C0C6 399 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 MKRN2Q9H000 416 aaKnown RBP10.71□□□□□ -0.69
CLK3-205ENST00000561673 CD93Q9NPY3 652 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 APEX2Q9UBZ4 518 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 PILRBQ9UKJ0 227 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 NAALADL1Q9UQQ1 740 aa10.71□□□□□ -0.69
CLK3-205ENST00000561673 MYO18AQ92614 2054 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 ATXN2Q99700 1313 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 GTPBP10A4D1E9 387 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 E5RJQ4 531 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 PAPSS1O43252 624 aaPredicted RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 THAP12O43422 761 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 ACSL4O60488 711 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 SYNCRIPO60506 623 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 TBL1XO60907 577 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 PRKCHP24723 683 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 SLC6A4P31645 630 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 USP8P40818 1118 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 MTIF2P46199 727 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 RING1Q06587 406 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 ZNF33AQ06730 810 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 STARD3Q14849 445 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 EIF4HQ15056 248 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 MEA1Q16626 185 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 TPD52L1Q16890 204 aaPredicted RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 SYPL2Q5VXT5 272 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 NUGGCQ68CJ6 796 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 NADSYN1Q6IA69 706 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 KIAA1324Q6UXG2 1013 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 KIAA0907Q7Z7F0 614 aaPredicted RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 ADIPOR2Q86V24 386 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 ADAM32Q8TC27 787 aa10.7□□□□□ -0.7
CLK3-205ENST00000561673 DQX1Q8TE96 717 aaKnown RBP10.7□□□□□ -0.7
CLK3-205ENST00000561673 AZIN2Q96A70 460 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms