RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 GPR179Q6PRD1 2367 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 YJEFN3A6XGL0 299 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 NT5C1B-RDH14C9J2C7 533 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 E7ENQ6 273 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 H7C4K7 107 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 MDM4O15151 490 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 TBC1D4O60343 1298 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 FGF18O76093 207 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 TJP3O95049 919 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 EFEMP2O95967 443 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 LTFP02788 710 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 OR4Q2P0C623 313 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 USP17L7P0C7H9 530 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 KRT10P13645 584 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 NOS2P35228 1153 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 SULT1E1P49888 294 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 ARSEP51690 589 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 YWHAZP63104 245 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 ADCY2Q08462 1091 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 CUL1Q13616 776 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 DPYSL3Q14195 570 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 NFE2Q16621 373 aaPredicted RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 CTXN3Q4LDR2 81 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 KCNT1Q5JUK3 1230 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 PM20D1Q6GTS8 502 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 CES5AQ6NT32 575 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 ZC3H14Q6PJT7 736 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 CCDC137Q6PK04 289 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 VSTM1Q6UX27 236 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 STRADAQ7RTN6 431 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 BNIPLQ7Z465 357 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 MTERF4Q7Z6M4 381 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 CEP57Q86XR8 500 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 JAMLQ86YT9 394 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 GSPT2Q8IYD1 628 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 DEFB106AQ8N104 65 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 KCTD6Q8NC69 237 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 AENQ8WTP8 325 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 C1orf54Q8WWF1 131 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 ATG4AQ8WYN0 398 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 RIN2Q8WYP3 895 aaPredicted RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 IRGQQ8WZA9 623 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 SEC14L1Q92503 715 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 HSPH1Q92598 858 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 SLCO2A1Q92959 643 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 NT5C3BQ969T7 300 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 FAM149B1Q96BN6 582 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 B3GALT6Q96L58 329 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 TBCBQ99426 244 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 TRIM51Q9BSJ1 452 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 TTPALQ9BTX7 342 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 SNRNP25Q9BV90 132 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 OXCT2Q9BYC2 517 aaPredicted RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 PLEKHA4Q9H4M7 779 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 POPDC2Q9HBU9 364 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 CHST7Q9NS84 486 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 HOMER3Q9NSC5 361 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.82□□□□□ -1.16
TPM1-231ENST00000561395 ABI2Q9NYB9 513 aaPredicted RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 CALCOCO1Q9P1Z2 691 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 RASAL2Q9UJF2 1139 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 STAP1Q9ULZ2 295 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 EFR3BQ9Y2G0 817 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 USP3Q9Y6I4 520 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 FASNP49327 2511 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 GREB1Q4ZG55 1949 aa7.82□□□□□ -1.16
TPM1-231ENST00000561395 MTCL1Q9Y4B5 1905 aaKnown RBP7.82□□□□□ -1.16
TPM1-231ENST00000561395 ZNF638Q14966 1978 aaKnown RBP7.81□□□□□ -1.16
TPM1-231ENST00000561395 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ZNF487B1APH4 448 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 TNFRSF10BO14763 440 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ENDOD1O94919 500 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ECEL1O95672 775 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 FYNP06241 537 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 CD48P09326 243 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 CYP2F1P24903 491 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 RDXP35241 583 aaKnown RBP7.81□□□□□ -1.16
TPM1-231ENST00000561395 GRIK1P39086 918 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 MAGEA11P43364 429 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ALDH7A1P49419 539 aaKnown RBP7.81□□□□□ -1.16
TPM1-231ENST00000561395 CARSP49589 748 aaKnown RBP7.81□□□□□ -1.16
TPM1-231ENST00000561395 SLC5A3P53794 718 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ATXN1P54253 815 aaKnown RBP7.81□□□□□ -1.16
TPM1-231ENST00000561395 CDH6P55285 790 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 SMARCB1Q12824 385 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 PDK2Q15119 407 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 CCNG2Q16589 344 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 BOLA3Q53S33 107 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 DCAF6Q58WW2 860 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 RTP2Q5QGT7 225 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 KAZNQ674X7 775 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 DUPD1Q68J44 220 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 SCYL2Q6P3W7 929 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ELMSAN1Q6PJG2 1045 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 BBS12Q6ZW61 710 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 ANKS3Q6ZW76 656 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 TAS1R1Q7RTX1 841 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 VSIG1Q86XK7 387 aa7.81□□□□□ -1.16
TPM1-231ENST00000561395 RNF168Q8IYW5 571 aaPredicted RBP7.81□□□□□ -1.16
TPM1-231ENST00000561395 SIX5Q8N196 739 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms