RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TMPRSS4Q9NRS4 437 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 DNAJC17Q9NVM6 304 aaKnown RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 AIPL1Q9NZN9 384 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 COX16Q9P0S2 106 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 MYO6Q9UM54 1294 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 TLR6Q9Y2C9 796 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 ZNF510Q9Y2H8 683 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 ARIH1Q9Y4X5 557 aaPredicted RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 TCRBV5S1A1TA0A578 114 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 KCNU1A8MYU2 1149 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 LAMTOR5O43504 91 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 ACSL4O60488 711 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 MOCS2O96007 188 aaPredicted RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 GYPCP04921 128 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 HOXD9P28356 352 aaPredicted RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 EIF2DP41214 584 aaKnown RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 KIR2DL1P43626 348 aaPredicted RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 HARS2P49590 506 aaKnown RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 TPM4P67936 248 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 AMPD2Q01433 879 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 CENPCQ03188 943 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 C2orf27AQ580R0 203 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 FIGNQ5HY92 759 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 ARTNQ5T4W7 220 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 ADGRF1Q5T601 910 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 FAM102AQ5T9C2 384 aaPredicted RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 HGSNATQ68CP4 663 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 MON1BQ7L1V2 547 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 PHF13Q86YI8 300 aaPredicted RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 EMC1Q8N766 993 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 NELL1Q92832 810 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 NT5C3BQ969T7 300 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 PRICKLE1Q96MT3 831 aaPredicted RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 SERPINB11Q96P15 392 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 TBCBQ99426 244 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 PRRX2Q99811 253 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 RBSNQ9H1K0 784 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 HAUS4Q9H6D7 363 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 METTL5Q9NRN9 209 aaKnown RBP14.45□□□□□ -0.1
TPM1-230ENST00000561266 WDR35Q9P2L0 1181 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 R4GN57 208 aa14.45□□□□□ -0.1
TPM1-230ENST00000561266 CHURC1-FNTBB4DL54 471 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 DDX3XO00571 662 aaKnown RBP eCLIP14.44□□□□□ -0.12e-8■■■■□ 19.9
TPM1-230ENST00000561266 APODP05090 189 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 PLEKP08567 350 aaPredicted RBP14.44□□□□□ -0.1
TPM1-230ENST00000561266 NOS2P35228 1153 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 CHKAP35790 457 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 SCNN1AP37088 669 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 GGCXP38435 758 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 GRIA2P42262 883 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 MATKP42679 507 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 NNTQ13423 1086 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 ASIC2Q16515 512 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 GEN1Q17RS7 908 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 SH3PXD2AQ5TCZ1 1133 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 PIK3R6Q5UE93 754 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 SFMBT2Q5VUG0 894 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 TMEM215Q68D42 235 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 TRIM72Q6ZMU5 477 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 BNIPLQ7Z465 357 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 ZDHHC17Q8IUH5 632 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 SYNPOQ8N3V7 929 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 TERB1Q8NA31 727 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 ATOH1Q92858 354 aaPredicted RBP14.44□□□□□ -0.1
TPM1-230ENST00000561266 CFAP57Q96MR6 1250 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 ACOX2Q99424 681 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 PRMT1Q99873 361 aaKnown RBP14.44□□□□□ -0.1
TPM1-230ENST00000561266 EDEM3Q9BZQ6 932 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 FAM204AQ9H8W3 233 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 PIGVQ9NUD9 493 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 SEPT11Q9NVA2 429 aaKnown RBP14.44□□□□□ -0.1
TPM1-230ENST00000561266 DDIT4Q9NX09 232 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM1-230ENST00000561266 DEC1Q9P2X7 70 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 SNX10Q9Y5X0 201 aa14.44□□□□□ -0.1
TPM1-230ENST00000561266 A0A1W2PQJ5 194 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 TMCO5BA8MYB1 307 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 M0QYT0 321 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 ADAM23O75077 832 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 ADCY5O95622 1261 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 LATS1O95835 1130 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 TIE1P35590 1138 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 PRKCIP41743 596 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 CXCL12P48061 93 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 PXNP49023 591 aaPredicted RBP14.43□□□□□ -0.1
TPM1-230ENST00000561266 IRAK1P51617 712 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 RPS24P62847 133 aaKnown RBP14.43□□□□□ -0.1
TPM1-230ENST00000561266 CDK17Q00537 523 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 NME3Q13232 169 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 EGFLAMQ63HQ2 1017 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 RAP1GAP2Q684P5 730 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 NUGGCQ68CJ6 796 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 RNF43Q68DV7 783 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 GRAMD4Q6IC98 578 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 ACAD10Q6JQN1 1059 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 C14orf80Q86SX3 495 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 UNC45BQ8IWX7 931 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 CFAP52Q8N1V2 620 aa14.43□□□□□ -0.1
TPM1-230ENST00000561266 ALLCQ8N6M5 410 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms