RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 IL12RB1P42701 662 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 GPD2P43304 727 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 DHPSP49366 369 aaPredicted RBP16.65■□□□□ 0.26
LMX1B-204ENST00000561065 STPG1Q5TH74 334 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 TMEFF1Q8IYR6 380 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 PGBD3Q8N328 593 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 IRGQQ8WZA9 623 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 HSFY1Q96LI6 401 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 EDEM2Q9BV94 578 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 MIS12Q9H081 205 aa16.65■□□□□ 0.26
LMX1B-204ENST00000561065 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
LMX1B-204ENST00000561065 NYNRINQ9P2P1 1898 aaKnown RBP16.65■□□□□ 0.26
LMX1B-204ENST00000561065 IGHV1OR15-9A0A0B4J2B8 117 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 PES1O00541 588 aaKnown RBP16.64■□□□□ 0.25
LMX1B-204ENST00000561065 TSPAN3O60637 253 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
LMX1B-204ENST00000561065 ENPP2Q13822 863 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 DPCR1Q3MIW9 517 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
LMX1B-204ENST00000561065 PPM1JQ5JR12 505 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 CCDC183Q5T5S1 534 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 ANKS1BQ7Z6G8 1248 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 ENOX1Q8TC92 643 aaKnown RBP16.64■□□□□ 0.25
LMX1B-204ENST00000561065 WFDC5Q8TCV5 224 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 SORCS1Q8WY21 1168 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 MRGPRX1Q96LB2 322 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 TMEM74BQ9NUR3 256 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 THAP10Q9P2Z0 257 aaPredicted RBP16.64■□□□□ 0.25
LMX1B-204ENST00000561065 TJP2Q9UDY2 1190 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 STON1Q9Y6Q2 735 aa16.64■□□□□ 0.25
LMX1B-204ENST00000561065 LETM1O95202 739 aaPredicted RBP16.63■□□□□ 0.25
LMX1B-204ENST00000561065 HLA-FP30511 346 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 SLC6A4P31645 630 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 HARS2P49590 506 aaKnown RBP16.63■□□□□ 0.25
LMX1B-204ENST00000561065 SNX16P57768 344 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 VWA3BQ502W6 1294 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 RNF43Q68DV7 783 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 LPCAT2Q7L5N7 544 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 DQX1Q8TE96 717 aaKnown RBP16.63■□□□□ 0.25
LMX1B-204ENST00000561065 DDI1Q8WTU0 396 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 MYEOVQ96EZ4 313 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 PRICKLE1Q96MT3 831 aaPredicted RBP16.63■□□□□ 0.25
LMX1B-204ENST00000561065 NDST4Q9H3R1 872 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 SIX2Q9NPC8 291 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 APEX2Q9UBZ4 518 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 CYP8B1Q9UNU6 501 aa16.63■□□□□ 0.25
LMX1B-204ENST00000561065 GOLGA6L7A0A1B0GV03 622 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 E5RJQ4 531 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 PAPSS1O43252 624 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-204ENST00000561065 FBXO21O94952 628 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 LATS1O95835 1130 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 CYBBP04839 570 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 PRKCHP24723 683 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 GNA15P30679 374 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 BPIFB4P59827 614 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 ZNF234Q14588 700 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 STX1AQ16623 288 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 FUT11Q495W5 492 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 PEAR1Q5VY43 1037 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-204ENST00000561065 NADSYN1Q6IA69 706 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 RFWD3Q6PCD5 774 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 RBM43Q6ZSC3 357 aaKnown RBP16.62■□□□□ 0.25
LMX1B-204ENST00000561065 SCUBE3Q8IX30 993 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 DEFB119Q8N690 84 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 ZNF606Q8WXB4 792 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 PIGKQ92643 395 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-204ENST00000561065 SLC4A5Q9BY07 1137 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 MKRN2Q9H000 416 aaKnown RBP16.62■□□□□ 0.25
LMX1B-204ENST00000561065 NAALADL1Q9UQQ1 740 aa16.62■□□□□ 0.25
LMX1B-204ENST00000561065 ASCC3Q8N3C0 2202 aaKnown RBP16.61■□□□□ 0.25
LMX1B-204ENST00000561065 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 THAP12O43422 761 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ADRB1P08588 477 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
LMX1B-204ENST00000561065 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ITPKAP23677 461 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 PON1P27169 355 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 PITX1P78337 314 aaPredicted RBP16.61■□□□□ 0.25
LMX1B-204ENST00000561065 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 MEA1Q16626 185 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ARHGAP44Q17R89 818 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ADGRF1Q5T601 910 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 LYSMD4Q5XG99 296 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 IL31Q6EBC2 164 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 DPY19L2P1Q6NXN4 242 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 TAC4Q86UU9 113 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 SLC41A1Q8IVJ1 513 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 SHC3Q92529 594 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 CIPCQ9C0C6 399 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ST7Q9NRC1 585 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 ELOVL2Q9NXB9 296 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms