RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CALML6Q8TD86 181 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 DNASE1L2Q92874 299 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 INPP4AQ96PE3 977 aaPredicted RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 PLEKHG4BQ96PX9 1271 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 SENP7Q9BQF6 1050 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.26□□□□□ -1.736e-7■■■■□ 22.6
HERC1-211ENST00000560983 IKZF4Q9H2S9 585 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 BOLA2Q9H3K6 86 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 PLEKHA4Q9H4M7 779 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 IL1RAPL2Q9NP60 686 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 TRPV5Q9NQA5 729 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 MRPL17Q9NRX2 175 aaKnown RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 RBM12Q9NTZ6 932 aaKnown RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 ZDHHC7Q9NXF8 308 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 DNAJB4Q9UDY4 337 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 DPP7Q9UHL4 492 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 GINS2Q9Y248 185 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 GIT1Q9Y2X7 761 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 MRPL11Q9Y3B7 192 aaKnown RBP4.26□□□□□ -1.73
HERC1-211ENST00000560983 PCDHA1Q9Y5I3 950 aa4.26□□□□□ -1.73
HERC1-211ENST00000560983 PATJQ8NI35 1801 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 ATMQ13315 3056 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 TICRRQ7Z2Z1 1910 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CAPN8A6NHC0 703 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 TSPY2A6NKD2 308 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 DCLK1O15075 740 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 EXTL3O43909 919 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 ZC3H11AO75152 810 aaKnown RBP eCLIP4.25□□□□□ -1.73
HERC1-211ENST00000560983 AKAP3O75969 853 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 DDHD2O94830 711 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 GOLGA8HP0CJ92 632 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 ITPKBP27987 946 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CCND2P30279 289 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 HOXA13P31271 388 aaPredicted RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 TDO2P48775 406 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CRYBB1P53674 252 aaPredicted RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 AK2P54819 239 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 INHBCP55103 352 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 SP4Q02446 784 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CREB5Q02930 508 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 PPARAQ07869 468 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CDC37Q16543 378 aaPredicted RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 SMN1Q16637 294 aaKnown RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 TMEM177Q53S58 311 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 BRAPQ7Z569 592 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 FGD2Q7Z6J4 655 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 PALB2Q86YC2 1186 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 RNF168Q8IYW5 571 aaPredicted RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 ADGRF4Q8IZF3 695 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 RNF169Q8NCN4 708 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 ADAMTS14Q8WXS8 1223 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 SEPT1Q8WYJ6 367 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 LARP4BQ92615 738 aaKnown RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 ARHGAP45Q92619 1136 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 MAGEB10Q96LZ2 347 aaPredicted RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 HAPLN2Q9GZV7 340 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CSRNP2Q9H175 543 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 FZD8Q9H461 694 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 SMARCAD1Q9H4L7 1026 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 SLC32A1Q9H598 525 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 ZNF334Q9HCZ1 680 aaPredicted RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 TBC1D13Q9NVG8 400 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 MAP3K20Q9NYL2 800 aaKnown RBP4.25□□□□□ -1.73
HERC1-211ENST00000560983 SFMBT1Q9UHJ3 866 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 TNNQ9UQP3 1299 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 ABCA12Q86UK0 2595 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 FBN2P35556 2912 aa4.25□□□□□ -1.73
HERC1-211ENST00000560983 CCDC194A0A1B0GVG4 234 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 B4E1Z4 1266 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 DVL2O14641 736 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 GPAA1O43292 621 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 FIBPO43427 364 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 OFD1O75665 1012 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 PRLP01236 227 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 APPP05067 770 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 ALDH2P05091 517 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 KCNA2P16389 499 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 ATP5JP18859 108 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 FCARP24071 287 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 CCNE1P24864 410 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 KLRC1P26715 233 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 RDXP35241 583 aaKnown RBP4.24□□□□□ -1.73
HERC1-211ENST00000560983 CSRP3P50461 194 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 SESN2P58004 480 aaPredicted RBP4.24□□□□□ -1.73
HERC1-211ENST00000560983 IRF9Q00978 393 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 QRICH1Q2TAL8 776 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 ODR4Q5SWX8 454 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 KLHDC10Q6PID8 442 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 D2HGDHQ8N465 521 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 PNPLA1Q8N8W4 532 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 HIPK4Q8NE63 616 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 ZSWIM2Q8NEG5 633 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 ZNF483Q8TF39 744 aaPredicted RBP4.24□□□□□ -1.73
HERC1-211ENST00000560983 ELSPBP1Q96BH3 223 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 SLC7A6OSQ96CW6 309 aaPredicted RBP4.24□□□□□ -1.73
HERC1-211ENST00000560983 CEP89Q96ST8 783 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 BOCQ9BWV1 1114 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 MRPL9Q9BYD2 267 aaKnown RBP4.24□□□□□ -1.73
HERC1-211ENST00000560983 SEMA4CQ9C0C4 833 aa4.24□□□□□ -1.73
HERC1-211ENST00000560983 SLC6A15Q9H2J7 730 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms