RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ARHGAP18Q8N392 663 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 LINC00301Q8NCQ3 95 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 SLC39A7Q92504 469 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 BIRC7Q96CA5 298 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 NXPE2Q96DL1 559 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 CRELD1Q96HD1 420 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 NT5C1AQ9BXI3 368 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 DUSP16Q9BY84 665 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 DNAI2Q9GZS0 605 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 PRORYQ9H606 182 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 CYP3A43Q9HB55 503 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 SGK2Q9HBY8 427 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 CLEC4EQ9ULY5 219 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 PLA2G4CQ9UP65 541 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 SLCO1B1Q9Y6L6 691 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 KNTC1P50748 2209 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 H0Y8X5 98 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 PPP6R2O75170 966 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 SEMA4FO95754 770 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 DHRS13Q6UX07 377 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 SV2AQ7L0J3 742 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 DENND1CQ8IV53 801 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 TMC2Q8TDI7 906 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 WFIKKN2Q8TEU8 576 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 DDI1Q8WTU0 396 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 SORCS1Q8WY21 1168 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 ELMO3Q96BJ8 720 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 DHX58Q96C10 678 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 SLC39A2Q9NP94 309 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 FTSJ1Q9UET6 329 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 STRIP2Q9ULQ0 834 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 KALRNO60229 2985 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 CKAP5Q14008 2032 aa19.42■□□□□ 0.7
TPM1-226ENST00000560959 HNF1BP35680 557 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 EIF2S3P41091 472 aaKnown RBP19.41■□□□□ 0.7
TPM1-226ENST00000560959 BCAT1P54687 386 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 ZNF445P59923 1031 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 EFEMP1Q12805 493 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 MPPE1Q53F39 396 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 C6orf118Q5T5N4 469 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 GOLGA1Q92805 767 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 JAKMIP2Q96AA8 810 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 DCBLD2Q96PD2 775 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 TWNKQ96RR1 684 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 BACH2Q9BYV9 841 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 MARCH2Q9P0N8 246 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 RASAL2Q9UJF2 1139 aa19.41■□□□□ 0.7
TPM1-226ENST00000560959 A0A1B0GTQ1 180 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 PLK4O00444 970 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 VILLO15195 856 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 SPTLC2O15270 562 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 RACK1P63244 317 aaKnown RBP19.4■□□□□ 0.7
TPM1-226ENST00000560959 DLG4P78352 724 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 STK38Q15208 465 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 LRRC69Q6ZNQ3 347 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 KIAA0907Q7Z7F0 614 aaPredicted RBP19.4■□□□□ 0.7
TPM1-226ENST00000560959 PIP4K2CQ8TBX8 421 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 SKA1Q96BD8 255 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 PLD4Q96BZ4 506 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 ORAI3Q9BRQ5 295 aa19.4■□□□□ 0.7
TPM1-226ENST00000560959 KCNK3O14649 394 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 RRP8O43159 456 aaKnown RBP19.39■□□□□ 0.69
TPM1-226ENST00000560959 C1QL1O75973 258 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 ZIC2O95409 532 aaPredicted RBP19.39■□□□□ 0.69
TPM1-226ENST00000560959 DNTTP04053 509 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 HMBSP08397 361 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 JUPP14923 745 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 RPS14P62263 151 aaKnown RBP19.39■□□□□ 0.69
TPM1-226ENST00000560959 RTP5Q14D33 572 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 TRIP4Q15650 581 aaPredicted RBP19.39■□□□□ 0.69
TPM1-226ENST00000560959 KCNT1Q5JUK3 1230 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 ADAT2Q7Z6V5 191 aaKnown RBP19.39■□□□□ 0.69
TPM1-226ENST00000560959 CACUL1Q86Y37 369 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.39■□□□□ 0.69
TPM1-226ENST00000560959 NRSN2Q9GZP1 204 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 UPF2Q9HAU5 1272 aaKnown RBP19.39■□□□□ 0.69
TPM1-226ENST00000560959 SUN2Q9UH99 717 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 STOML2Q9UJZ1 356 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 SCML1Q9UN30 329 aa19.39■□□□□ 0.69
TPM1-226ENST00000560959 CUTAO60888 179 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 HLA-DRAP01903 254 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 PRB1P04280 392 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 HOXD9P28356 352 aaPredicted RBP19.38■□□□□ 0.69
TPM1-226ENST00000560959 HLA-FP30511 346 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 C21orf59P57076 290 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 TTC31Q49AM3 519 aaPredicted RBP19.38■□□□□ 0.69
TPM1-226ENST00000560959 FNDC3BQ53EP0 1204 aaKnown RBP19.38■□□□□ 0.69
TPM1-226ENST00000560959 RAB41Q5JT25 222 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 SPOPLQ6IQ16 392 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 USP30Q70CQ3 517 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 CACTIN-AS1Q8N1I8 211 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 FAXDC2Q96IV6 333 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 ACE2Q9BYF1 805 aaPredicted RBP19.38■□□□□ 0.69
TPM1-226ENST00000560959 IMPG2Q9BZV3 1241 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 PRSS16Q9NQE7 514 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 MTMR6Q9Y217 621 aa19.38■□□□□ 0.69
TPM1-226ENST00000560959 SLC12A8A0AV02 714 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 CAPN8A6NHC0 703 aa19.37■□□□□ 0.69
TPM1-226ENST00000560959 PDXKO00764 312 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms