RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 LRCH4O75427 683 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 STC2O76061 302 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 ENDOD1O94919 500 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 TRUB2O95900 331 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 MBL2P11226 248 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 TCF4P15884 667 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 PDGFRAP16234 1089 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 HDCP19113 662 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SP100P23497 879 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SDC4P31431 198 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 RDXP35241 583 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 ATP5C1P36542 298 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 KCNQ1P51787 676 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 HDAC4P56524 1084 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 TRIP4Q15650 581 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 CDO1Q16878 200 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 FAM78AQ5JUQ0 283 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 DAB2IPQ5VWQ8 1189 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 DCUN1D2Q6PH85 259 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 CYP4V2Q6ZWL3 525 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 STRADAQ7RTN6 431 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 MIB1Q86YT6 1006 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 REXO1L1PQ8IX06 675 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 ARFGAP1Q8N6T3 406 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 TDRD5Q8NAT2 981 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SLC35G2Q8TBE7 412 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 FAM172AQ8WUF8 416 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 CENPIQ92674 756 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SLC39A13Q96H72 371 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SERPINB11Q96P15 392 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 PEBP4Q96S96 227 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 CNPY3Q9BT09 278 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 PHF7Q9BWX1 381 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 NACA2Q9H009 215 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SLITRK6Q9H5Y7 841 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 FAM204AQ9H8W3 233 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 TRPV4Q9HBA0 871 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 DDIT4Q9NX09 232 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SMPD4Q9NXE4 827 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 RRN3Q9NYV6 651 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 GDE1Q9NZC3 331 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 MARCH2Q9P0N8 246 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 USTQ9Y2C2 406 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 TLR6Q9Y2C9 796 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 HBS1LQ9Y450 684 aaKnown RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 CAPN6Q9Y6Q1 641 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 ZFP37Q9Y6Q3 630 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 VCANP13611 3396 aa7.32□□□□□ -1.24
CTDSPL2-210ENST00000560834 SYNJ2BP-COX16A0A087WUM0 186 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 SLC12A8A0AV02 714 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 GRID2IPA4D2P6 1211 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 LEFTY2O00292 366 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 BUB1O43683 1085 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 BUB1BO60566 1050 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 PROSCO94903 275 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 MOCS3O95396 460 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 HMBSP08397 361 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 IRF1P10914 325 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 LAMP2P13473 410 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 PSMA2P25787 234 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 MAN1A1P33908 653 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 AVPR1AP37288 418 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 CXCR3P49682 368 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 ATP11AP98196 1134 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 SLC25A11Q02978 314 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 DEUP1Q05D60 604 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 RING1Q06587 406 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 KIF5AQ12840 1032 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 NME3Q13232 169 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 HTR4Q13639 388 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 SUZ12Q15022 739 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 ARTNQ5T4W7 220 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 C11orf63Q6NUN7 778 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 BRICD5Q6PL45 260 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 VITQ6UXI7 678 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 ARID3BQ8IVW6 561 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 TXLNBQ8N3L3 684 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 LRRC57Q8N9N7 239 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 ST13P5Q8NFI4 369 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 TPCN2Q8NHX9 752 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 SH3RF2Q8TEC5 729 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 FGF14Q92915 247 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 SMARCD2Q92925 531 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 PLD4Q96BZ4 506 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 ASIC4Q96FT7 647 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 LRRC3BQ96PB8 259 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 USB1Q9BQ65 265 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 TSGA10Q9BZW7 698 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 GOLPH3Q9H4A6 298 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 GKN1Q9NS71 199 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 TDP1Q9NUW8 608 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 ARHGEF38Q9NXL2 777 aa7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.31□□□□□ -1.24
CTDSPL2-210ENST00000560834 COX16Q9P0S2 106 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms