RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 PDE1BQ01064 536 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 UBE3AQ05086 875 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ITGA7Q13683 1181 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 DAG1Q14118 895 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 WTAPQ15007 396 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 BCL2A1Q16548 175 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 KIF6Q6ZMV9 814 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 C3orf62Q6ZUJ4 267 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 HERC6Q8IVU3 1022 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ARHGEF39Q8N4T4 335 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 IL31RAQ8NI17 732 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 LRRC8CQ8TDW0 803 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 DQX1Q8TE96 717 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 SH3RF3Q8TEJ3 882 aaPredicted RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 NELFBQ8WX92 580 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 LBHD1Q9BQE6 289 aaPredicted RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ALG1Q9BT22 464 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ITPAQ9BY32 194 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 TAOK3Q9H2K8 898 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 PCIF1Q9H4Z3 704 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 SPEF2Q9C093 1822 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 DOT1LQ8TEK3 1739 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 MYH13Q9UKX3 1938 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 NUP98P52948 1817 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 DLL1O00548 723 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 FCHO1O14526 889 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF263O14978 683 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 SIAH2O43255 324 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 CIAO1O76071 339 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 CYP17A1P05093 508 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 STMN1P16949 149 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 MSX1P28360 303 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 MC4RP32245 332 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 IL15P40933 162 aaPredicted RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 USP11P51784 963 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 RPS16P62249 146 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 TNNC1P63316 161 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 PLAURQ03405 335 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 AUHQ13825 339 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ANKDD1AQ495B1 522 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 SPDYCQ5MJ68 293 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ACAD10Q6JQN1 1059 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 MIGA2Q7L4E1 593 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 TTC39CQ8N584 583 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 ARRDC4Q8NCT1 418 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 PGM2Q96G03 612 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 GSDMAQ96QA5 445 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 SLC30A3Q99726 388 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 SELENOSQ9BQE4 189 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 EIF2AQ9BY44 585 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 IFIH1Q9BYX4 1025 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 EPS8L2Q9H6S3 715 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 UBAP1Q9NZ09 502 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 LAMP5Q9UJQ1 280 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 DBNLQ9UJU6 430 aaKnown RBP6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 FBXL21Q9UKT6 434 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 CTNND2Q9UQB3 1225 aa6.99□□□□□ -1.29
TSPAN3-209ENST00000560715 KRT87PA6NCN2 255 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 H0Y626 953 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 H3BNC9 293 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 H3BUI4 141 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 WNT7AO00755 349 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 GABBR2O75899 941 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 FGFR2P21802 821 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PNLIPRP1P54315 467 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 SUMO3P55854 103 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 NR5A1Q13285 461 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 MCMDC2Q4G0Z9 681 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 MEX3CQ5U5Q3 659 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 BTNL9Q6UXG8 535 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 MARK2Q7KZI7 788 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 SZRD1Q7Z422 152 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 TMC3Q7Z5M5 1100 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PALB2Q86YC2 1186 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 ZFPM1Q8IX07 1006 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 DNAJC10Q8IXB1 793 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 DCAF4Q8WV16 495 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 STAMQ92783 540 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 MRGPRX2Q96LB1 330 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 HNRNPABQ99729 332 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PLA2G12BQ9BX93 195 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 NRDE2Q9H7Z3 1164 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 JMJD4Q9H9V9 463 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 DDX43Q9NXZ2 648 aaKnown RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 BTBD7Q9P203 1132 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 RWDD2AQ9UIY3 292 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 HIF3AQ9Y2N7 669 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 URADA6NGE7 173 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 NT5C1B-RDH14C9J2C7 533 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 H0Y8X5 98 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 H7C1D1 291 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF862O60290 1169 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 CSPG5O95196 566 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 APOL3O95236 402 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 PCCAP05165 728 aaPredicted RBP6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 IFNGR1P15260 489 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 GCH1P30793 250 aa6.98□□□□□ -1.29
TSPAN3-209ENST00000560715 HOXC12P31275 282 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms