RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 SGCZQ96LD1 299 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 CGRRF1Q99675 332 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 TMEM47Q9BQJ4 181 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 SDF4Q9BRK5 362 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 B3GNT5Q9BYG0 378 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 COA1Q9GZY4 146 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 HSD3B7Q9H2F3 369 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 RSAD1Q9HA92 442 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 TCP11L1Q9NUJ3 509 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 RBM28Q9NW13 759 aaKnown RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 TRPM5Q9NZQ8 1165 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 DKK2Q9UBU2 259 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 EIF2B4Q9UI10 523 aaKnown RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 TUBE1Q9UJT0 475 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 PCDHGB3Q9Y5G1 929 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 KAT6AQ92794 2004 aa4.82□□□□□ -1.64
TMOD3-207ENST00000560549 COL11A2P13942 1736 aaPredicted RBP4.82□□□□□ -1.64
TMOD3-207ENST00000560549 A0A087X1B8 175 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 IGKV6D-41A0A0C4DH26 115 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CENPVL1A0A0U1RR11 272 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 FAM171A2A8MVW0 826 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PRR5-ARHGAP8B1AHC4 643 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PTMAP06454 111 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SLC3A2P08195 630 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SCG2P13521 617 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PTPN7P35236 360 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 KRT2P35908 639 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SYKP43405 635 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 NOVP48745 357 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 AGFG1P52594 562 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 GABPAQ06546 454 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PFKFB3Q16875 520 aaPredicted RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SHROOM1Q2M3G4 852 aaPredicted RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PDCD4Q53EL6 469 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 APOBEC3HQ6NTF7 200 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CDC42EP5Q6NZY7 148 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 DRICH1Q6PGQ1 229 aaPredicted RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 GDF7Q7Z4P5 450 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MRGPRGQ86SM5 289 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SUGP1Q8IWZ8 645 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 RHOT1Q8IXI2 618 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 AOPEPQ8N6M6 819 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 C4orf32Q8N8J7 132 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 FAM156AQ8NDB6 213 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 HAS1Q92839 578 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MASTLQ96GX5 879 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PAWRQ96IZ0 340 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 EPSTI1Q96J88 318 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TIGD1Q96MW7 591 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 EYA3Q99504 573 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TMEM60Q9H2L4 133 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 KAT14Q9H8E8 782 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 DBNDD1Q9H9R9 158 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 BCO1Q9HAY6 547 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ANO10Q9NW15 660 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 FZD1Q9UP38 647 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SRPRBQ9Y5M8 271 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CFAP20Q9Y6A4 193 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 LTBP1Q14766 1721 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ECM29Q5VYK3 1845 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SLX4Q8IY92 1834 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 GRID2IPA4D2P6 1211 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TLR5O60602 858 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PHF2O75151 1096 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 RHOBTB3O94955 611 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ITGB1P05556 798 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TSPY3P0CV98 308 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TSPY8P0CW00 308 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 AKR1B1P15121 316 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 HTR1BP28222 390 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CASP1P29466 404 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ECHS1P30084 290 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PTGS2P35354 604 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ALDH1A3P47895 512 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CACNB3P54284 484 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 NLRP5P59047 1200 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 AKAP17AQ02040 695 aaKnown RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 LRMPQ12912 555 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 LONRF1Q17RB8 773 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 RILPL1Q5EBL4 403 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 AFMIDQ63HM1 303 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SARM1Q6SZW1 724 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PIK3AP1Q6ZUJ8 805 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MIGA2Q7L4E1 593 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CCDC186Q7Z3E2 898 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ZNF444Q8N0Y2 327 aaPredicted RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CAMKK1Q8N5S9 505 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 CTCFLQ8NI51 663 aaPredicted RBP4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TBC1D22AQ8WUA7 517 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 STON2Q8WXE9 905 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 TFAP2CQ92754 450 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 NT5C1BQ96P26 610 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MED15Q96RN5 788 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SERINC2Q96SA4 455 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 ADAM2Q99965 735 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MYOCQ99972 504 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms