RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 CAMK2GQ13555 558 aaPredicted RBP12.15□□□□□ -0.46
IRF9-209ENST00000560365 E2F4Q16254 413 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 PTPRNQ16849 979 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 ZACNQ401N2 412 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 C1orf216Q8TAB5 229 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 WFIKKN2Q8TEU8 576 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 SORCS1Q8WY21 1168 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 PLD4Q96BZ4 506 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 BIRC7Q96CA5 298 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 CRELD1Q96HD1 420 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 GZF1Q9H116 711 aaPredicted RBP12.15□□□□□ -0.46
IRF9-209ENST00000560365 SGK2Q9HBY8 427 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 PCDHGA1Q9Y5H4 931 aa12.15□□□□□ -0.46
IRF9-209ENST00000560365 LAMA5O15230 3695 aa12.15□□□□□ -0.47
IRF9-209ENST00000560365 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 H0Y8X5 98 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 KCNK3O14649 394 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 VNN1O95497 513 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 ASS1P00966 412 aaKnown RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 ATP5BP06576 529 aaKnown RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 ITGAVP06756 1048 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 CD58P19256 250 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 ASPAP45381 313 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 IL9RQ01113 521 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 SEMG2Q02383 582 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 SV2AQ7L0J3 742 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 SCD5Q86SK9 330 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 ZNF605Q86T29 641 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 LSM14AQ8ND56 463 aaKnown RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 PLEKHO2Q8TD55 490 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 ZNF396Q96N95 335 aaPredicted RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 DUSP16Q9BY84 665 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 SCML1Q9UN30 329 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 FRMD4BQ9Y2L6 1034 aa12.14□□□□□ -0.47
IRF9-209ENST00000560365 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
IRF9-209ENST00000560365 CAPN8A6NHC0 703 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 FAM47DPA6NHR8 397 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 ENC1O14682 589 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 IKBKBO14920 756 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 YKT6O15498 198 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 TSPAN3O60637 253 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 PPP6R2O75170 966 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 RFPL3O75679 317 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 LDOC1O95751 146 aaPredicted RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 PRB1P04280 392 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 C1SP09871 688 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CTSKP43235 329 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 ST8SIA6P61647 398 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 YWHAGP61981 247 aaKnown RBP eCLIP12.13□□□□□ -0.47
IRF9-209ENST00000560365 RACK1P63244 317 aaKnown RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 DLG4P78352 724 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 PDE4CQ08493 712 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 INCA1Q0VD86 236 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 ZNF776Q68DI1 518 aaPredicted RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 LAYNQ6UX15 382 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CHST9Q7L1S5 443 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 ZNF557Q8N988 423 aaPredicted RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CYB5D2Q8WUJ1 264 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CNDP2Q96KP4 475 aaKnown RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 HEXIM2Q96MH2 286 aaKnown RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 FCRL3Q96P31 734 aaPredicted RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 ARID3AQ99856 593 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 OLA1Q9NTK5 396 aaKnown RBP12.13□□□□□ -0.47
IRF9-209ENST00000560365 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 USP3Q9Y6I4 520 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 IGSF10Q6WRI0 2623 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 PI4KAP42356 2102 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 LOC400499M0QZD8 3231 aa12.13□□□□□ -0.47
IRF9-209ENST00000560365 CEP192Q8TEP8 1941 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 VILLO15195 856 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 PAPSS1O43252 624 aaPredicted RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 CUTAO60888 179 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 POLR2EP19388 210 aaKnown RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 ITPKBP27987 946 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 EIF2S3P41091 472 aaKnown RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 AFMP43652 599 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 ARRB1P49407 418 aaPredicted RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 RPS14P62263 151 aaKnown RBP12.12□□□□□ -0.47
IRF9-209ENST00000560365 CUL4AQ13619 759 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
IRF9-209ENST00000560365 SLC45A4Q5BKX6 768 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms