RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 ARL13BQ3SXY8 428 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 ATP13A4Q4VNC1 1196 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 KCNT1Q5JUK3 1230 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 ATP6V0D2Q8N8Y2 350 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 FAM71BQ8TC56 605 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 SUSD6Q92537 303 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 ALG3Q92685 438 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 FGF13Q92913 245 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 AZIN2Q96A70 460 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 ZSWIM3Q96MP5 696 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 NECTIN4Q96NY8 510 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 HAPLN3Q96S86 360 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 SLITRK6Q9H5Y7 841 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 UBE2ZQ9H832 354 aaPredicted RBP14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 GKN1Q9NS71 199 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 GDE1Q9NZC3 331 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 XIRP2A4UGR9 3374 aa14.16□□□□□ -0.14
HMBOX1-213ENST00000560269 GREM1O60565 184 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 PRLRP16471 622 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 GJC1P36383 396 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 HARS2P49590 506 aaKnown RBP14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 CBX2Q14781 532 aaPredicted RBP14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 DPYSL2Q16555 572 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 CA9Q16790 459 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 SMTNL2Q2TAL5 461 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 EFHC2Q5JST6 749 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 ACBD5Q5T8D3 534 aaPredicted RBP14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 GET4Q7L5D6 327 aaPredicted RBP14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 DDX42Q86XP3 938 aaKnown RBP eCLIP14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 EXD1Q8NHP7 514 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 BTN2A3PQ96KV6 586 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 C1orf74Q96LT6 269 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 DCLK3Q9C098 648 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 OSBPL2Q9H1P3 480 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 CARD9Q9H257 536 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 TMPRSS4Q9NRS4 437 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 TDP1Q9NUW8 608 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 SMPD4Q9NXE4 827 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 SLC12A6Q9UHW9 1150 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 CDH7Q9ULB5 785 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 SNX12Q9UMY4 172 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 AP4E1Q9UPM8 1137 aa14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 USP15Q9Y4E8 981 aaPredicted RBP14.15□□□□□ -0.14
HMBOX1-213ENST00000560269 C3orf70A6NLC5 250 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 LEFTY2O00292 366 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 PAGE1O75459 146 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 PRAMEF12O95522 483 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 LATS1O95835 1130 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 KLKB1P03952 638 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 KRT1P04264 644 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 KDELR1P24390 212 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 CORO1AP31146 461 aaKnown RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 L1CAMP32004 1257 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 AMPD2Q01433 879 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 NRG1Q02297 640 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 SMAD4Q13485 552 aaKnown RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 PDK2Q15119 407 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 CLUL1Q15846 466 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 DCAF12L1Q5VU92 463 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 Q6ZNB5 142 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 VSIG1Q86XK7 387 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 ARID3BQ8IVW6 561 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 RCOR2Q8IZ40 523 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 ZSCAN18Q8TBC5 510 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 HSPH1Q92598 858 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 USP13Q92995 863 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 WBP2Q969T9 261 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 ACSF2Q96CM8 615 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 ASB16Q96NS5 453 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 POMKQ9H5K3 350 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 KIF9Q9HAQ2 790 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 TRPV4Q9HBA0 871 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 GPATCH2LQ9NWQ4 482 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 XPO7Q9UIA9 1087 aaKnown RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 STOML2Q9UJZ1 356 aa14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 ZFP37Q9Y6Q3 630 aaPredicted RBP14.14□□□□□ -0.15
HMBOX1-213ENST00000560269 DOCK8Q8NF50 2099 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 E2F8A0AVK6 867 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 ZNF487B1APH4 448 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 H3BQ06 376 aaPredicted RBP14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 CES2O00748 559 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 KCNK3O14649 394 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 ACSL4O60488 711 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 ZRANB2O95218 330 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■□□ 16.1
HMBOX1-213ENST00000560269 MOCS2O96007 188 aaPredicted RBP14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 IRF1P10914 325 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 TCP1P17987 556 aaKnown RBP14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 KCNA5P22460 613 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 SLC11A2P49281 568 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 DNA2P51530 1060 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 ZNF135P52742 658 aaPredicted RBP14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 MLLT6P55198 1093 aaPredicted RBP14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 COPS2P61201 443 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 USP4Q13107 963 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 SEMA3BQ13214 749 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 TAZQ16635 292 aa14.13□□□□□ -0.15
HMBOX1-213ENST00000560269 PIK3R6Q5UE93 754 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms