RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 TBC1D20Q96BZ9 403 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 SNX18Q96RF0 628 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 MECRQ9BV79 373 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 PABPC3Q9H361 631 aaKnown RBP5.62□□□□□ -1.51
CRNDE-208ENST00000560029 PRDM8Q9NQV8 689 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 FBXO28Q9NVF7 368 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 SERGEFQ9UGK8 458 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 WNT6Q9Y6F9 365 aa5.62□□□□□ -1.51
CRNDE-208ENST00000560029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.61□□□□□ -1.51
CRNDE-208ENST00000560029 FAM90A18PA6NE21 464 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 FAM90A16PA6NEW6 464 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 FAM90A9PA6NNJ1 464 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 FAM90A5PA8MXJ8 464 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 SMIM22K7EJ46 135 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 M0QYT0 321 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 MBPP02686 304 aaPredicted RBP5.61□□□□□ -1.51
CRNDE-208ENST00000560029 FAM90A15PP0C7V4 464 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 FAM90A14PP0C7W9 464 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 PEPDP12955 493 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 THBS4P35443 961 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 IGHMBP2P38935 993 aaKnown RBP5.61□□□□□ -1.51
CRNDE-208ENST00000560029 SOX10P56693 466 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 TAF5Q15542 800 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 ANKRD40Q6AI12 368 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 SERPINA13PQ6UXR4 307 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 RRAGAQ7L523 313 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 TRABD2AQ86V40 505 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 SUGP1Q8IWZ8 645 aaKnown RBP5.61□□□□□ -1.51
CRNDE-208ENST00000560029 GALNT15Q8N3T1 639 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 WASF1Q92558 559 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 RSC1A1Q92681 617 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 HS6ST2Q96MM7 605 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 PAAF1Q9BRP4 392 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 BRD8Q9H0E9 1235 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 DAPP1Q9UN19 280 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 CNTN6Q9UQ52 1028 aa5.61□□□□□ -1.51
CRNDE-208ENST00000560029 GXYLT2A0PJZ3 443 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 FYB1O15117 783 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 MT-CO3P00414 261 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 NHLRC4P0CG21 123 aaPredicted RBP5.6□□□□□ -1.51
CRNDE-208ENST00000560029 MMP8P22894 467 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 CFHR3Q02985 330 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 MFSD13AQ14CX5 517 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 GPR162Q16538 588 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 AWAT1Q58HT5 328 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 C16orf89Q6UX73 402 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 LINC01465Q8N7H1 131 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 MYRIPQ8NFW9 859 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 HMGB4Q8WW32 186 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 NPIPB3Q92617 1050 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 TRIM63Q969Q1 353 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 C3orf49Q96BT1 292 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 SCLT1Q96NL6 688 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 FAM167BQ9BTA0 163 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 CHMP4AQ9BY43 222 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 VPS16Q9H269 839 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 CCDC134Q9H6E4 229 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 ELAC1Q9H777 363 aaKnown RBP5.6□□□□□ -1.51
CRNDE-208ENST00000560029 ITM2CQ9NQX7 267 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 SRP68Q9UHB9 627 aaKnown RBP5.6□□□□□ -1.51
CRNDE-208ENST00000560029 FZD4Q9ULV1 537 aa5.6□□□□□ -1.51
CRNDE-208ENST00000560029 LOC105369274A0A096LPK9 316 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 LOC102723532A0A0G2JNH3 316 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 TCRBV5S1A1TA0A578 114 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 CLIC1O00299 241 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 GCATO75600 419 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 DHRS4L1P0CG22 281 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 PPM1FP49593 454 aaPredicted RBP5.59□□□□□ -1.51
CRNDE-208ENST00000560029 JAK3P52333 1124 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 PRKAA2P54646 552 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 SF3A3Q12874 501 aaKnown RBP eCLIP5.59□□□□□ -1.51
CRNDE-208ENST00000560029 RPS6KA2Q15349 733 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 FAM187BQ17R55 369 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 AAK1Q2M2I8 961 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 TRIM60Q495X7 471 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 TMEM119Q4V9L6 283 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 NFRKBQ6P4R8 1299 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 TMEM65Q6PI78 240 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 DCDC5Q6ZRR9 648 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 RAB11FIP2Q7L804 512 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 OR4N4Q8N0Y3 316 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 KAZALD1Q96I82 304 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 REXO5Q96IC2 774 aaKnown RBP5.59□□□□□ -1.51
CRNDE-208ENST00000560029 CCDC17Q96LX7 622 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 TRAPPC9Q96Q05 1148 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 TAF1DQ9H5J8 278 aaPredicted RBP5.59□□□□□ -1.51
CRNDE-208ENST00000560029 RXFP3Q9NSD7 469 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 ABHD10Q9NUJ1 306 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 LUZP4Q9P127 313 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 RAB21Q9UL25 225 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 NFU1Q9UMS0 254 aa5.59□□□□□ -1.51
CRNDE-208ENST00000560029 UBE2J1Q9Y385 318 aaPredicted RBP5.59□□□□□ -1.51
CRNDE-208ENST00000560029 H0Y3Z8 333 aa5.58□□□□□ -1.52
CRNDE-208ENST00000560029 H7C1Q1 480 aa5.58□□□□□ -1.52
CRNDE-208ENST00000560029 TP73O15350 636 aa5.58□□□□□ -1.52
CRNDE-208ENST00000560029 CYP2D6P10635 497 aa5.58□□□□□ -1.52
CRNDE-208ENST00000560029 ATF7P17544 494 aaPredicted RBP5.58□□□□□ -1.52
CRNDE-208ENST00000560029 FAM3BP58499 235 aaPredicted RBP5.58□□□□□ -1.52
CRNDE-208ENST00000560029 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms