RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 NLRC4Q9NPP4 1024 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 SPTLC3Q9NUV7 552 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 CDH9Q9ULB4 789 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 BPTFQ12830 3046 aa21.56■■□□□ 1.04
PSEN1-225ENST00000560005 PLXNB3Q9ULL4 1909 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 LRRC53A6NM62 1247 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 GJB3O75712 270 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 TUBB4AP04350 444 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 MBL2P11226 248 aaPredicted RBP21.55■■□□□ 1.04
PSEN1-225ENST00000560005 STAT1P42224 750 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 WASP42768 502 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 SLC14A1Q13336 389 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 MAPRE1Q15691 268 aaKnown RBP21.55■■□□□ 1.04
PSEN1-225ENST00000560005 DUOXA2Q1HG44 320 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 PLEKHG6Q3KR16 790 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 DPY19L2P1Q6NXN4 242 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 SV2AQ7L0J3 742 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 ENOSF1Q7L5Y1 443 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 NAXDQ8IW45 347 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 BBC3Q96PG8 261 aaPredicted RBP21.55■■□□□ 1.04
PSEN1-225ENST00000560005 PDE11AQ9HCR9 933 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 SIX2Q9NPC8 291 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 RAB20Q9NX57 234 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 TBC1D14Q9P2M4 693 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 RAXQ9Y2V3 346 aa21.55■■□□□ 1.04
PSEN1-225ENST00000560005 SSU72P8A0A1W2PR75 194 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 F8VP50 259 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 TRIM66O15016 1216 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 EPHB6O15197 1021 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 TULP3O75386 442 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 SERPING1P05155 500 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 PDGFRBP09619 1106 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 CCDC175P0C221 793 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 FERP16591 822 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 NOP14P78316 857 aaKnown RBP21.54■■□□□ 1.04
PSEN1-225ENST00000560005 GAD2Q05329 585 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 TAF10Q12962 218 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 ZACNQ401N2 412 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 C10orf76Q5T2E6 689 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 DDX42Q86XP3 938 aaKnown RBP eCLIP21.54■■□□□ 1.04
PSEN1-225ENST00000560005 ETFBKMTQ8IXQ9 262 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 RGL4Q8IZJ4 473 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 CCAR2Q8N163 923 aaKnown RBP21.54■■□□□ 1.04
PSEN1-225ENST00000560005 TXLNBQ8N3L3 684 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 LMO3Q8TAP4 145 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 KCNV2Q8TDN2 545 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 COL26A1Q96A83 441 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 ERLEC1Q96DZ1 483 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 PCED1BQ96HM7 432 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 CCDC42Q96M95 316 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 NT5C1BQ96P26 610 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 HCN2Q9UL51 889 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 CYP8B1Q9UNU6 501 aa21.54■■□□□ 1.04
PSEN1-225ENST00000560005 A0A1W2PQF6 199 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 KIF2AO00139 706 aaPredicted RBP21.53■■□□□ 1.04
PSEN1-225ENST00000560005 ZIC2O95409 532 aaPredicted RBP21.53■■□□□ 1.04
PSEN1-225ENST00000560005 C4BPAP04003 597 aaKnown RBP21.53■■□□□ 1.04
PSEN1-225ENST00000560005 TMEM191BP0C7N4 346 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 MFAP3P55082 362 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 KRT83P78385 493 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 MYO1EQ12965 1108 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 RAPGEF1Q13905 1077 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 ASIC2Q16515 512 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 BTBD8Q5XKL5 378 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 WDR59Q6PJI9 974 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 DPH6Q7L8W6 267 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 LIMS2Q7Z4I7 341 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 MIB1Q86YT6 1006 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 DEC1Q9P2X7 70 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 DNAJC12Q9UKB3 198 aa21.53■■□□□ 1.04
PSEN1-225ENST00000560005 R3HCC1Q9Y3T6 440 aaKnown RBP21.53■■□□□ 1.04
PSEN1-225ENST00000560005 EPN1Q9Y6I3 576 aaPredicted RBP21.53■■□□□ 1.04
PSEN1-225ENST00000560005 E2F8A0AVK6 867 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 PHACTR2O75167 634 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 ZNF217O75362 1048 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 TNNC2P02585 160 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 NDUFV2P19404 249 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 NTSR1P30989 418 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 IFRD2Q12894 506 aaPredicted RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 MAPK8IP2Q13387 824 aaPredicted RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 BIRC3Q13489 604 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 MDH1BQ5I0G3 518 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 TDRD10Q5VZ19 366 aaKnown RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 VPS36Q86VN1 386 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 TERB1Q8NA31 727 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 MYCBPAPQ8TBZ2 947 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 JAKMIP2Q96AA8 810 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 HPDLQ96IR7 371 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 ANKRD36BP1Q96IX9 119 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 LRIG1Q96JA1 1093 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 C8orf48Q96LL4 319 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 SLITRK1Q96PX8 696 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 IMPG2Q9BZV3 1241 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 FAM124BQ9H5Z6 455 aaPredicted RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 CD93Q9NPY3 652 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 LUC7LQ9NQ29 371 aaKnown RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 APOBEC2Q9Y235 224 aaKnown RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 FHOD1Q9Y613 1164 aa21.52■■□□□ 1.04
PSEN1-225ENST00000560005 ASH1LQ9NR48 2969 aaKnown RBP21.52■■□□□ 1.04
PSEN1-225ENST00000560005 SOWAHDA6NJG2 315 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms