RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 NAALADL1Q9UQQ1 740 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 CACNA1AO00555 2505 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 TCRBV21S2A2A0A5A6 115 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 CAPN9O14815 690 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 TSPAN3O60637 253 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 LRP3O75074 770 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 IGLV3-25P01717 112 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ERBB2P04626 1255 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 RETP07949 1114 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 CYP11B1P15538 503 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ZNF18P17022 549 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 TGM1P22735 817 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 NTSR1P30989 418 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 SLC6A4P31645 630 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 CDH5P33151 784 aaPredicted RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 KRT9P35527 623 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 KLK7P49862 253 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 COPB1P53618 953 aaKnown RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 YWHAZP63104 245 aaKnown RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 PITX1P78337 314 aaPredicted RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 NCAPHQ15003 741 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 PTPN20Q4JDL3 420 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ADGRF1Q5T601 910 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 RNF43Q68DV7 783 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 NADSYN1Q6IA69 706 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 OLFML1Q6UWY5 402 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 FAM183BPQ6ZVS7 135 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 CACNA2D4Q7Z3S7 1137 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 UNC45BQ8IWX7 931 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 AOPEPQ8N6M6 819 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 OLIG1Q8TAK6 271 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ADAM32Q8TC27 787 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 DDI1Q8WTU0 396 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 SLC39A13Q96H72 371 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ZC3H10Q96K80 434 aaKnown RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 PPP1R13BQ96KQ4 1090 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 PRICKLE1Q96MT3 831 aaPredicted RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ACOX2Q99424 681 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 GABRG3Q99928 467 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 SLC2A11Q9BYW1 496 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 DUSP15Q9H1R2 295 aaPredicted RBP11.39□□□□□ -0.59
SPG11-216ENST00000559347 HSD3B7Q9H2F3 369 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 CD248Q9HCU0 757 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ASNSD1Q9NWL6 643 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 TLR6Q9Y2C9 796 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 SIK3Q9Y2K2 1263 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 ABCA7Q8IZY2 2146 aa11.39□□□□□ -0.59
SPG11-216ENST00000559347 A0A1W2PQF6 199 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 LGALS16A8MUM7 142 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 DCLK1O15075 740 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 EPHB6O15197 1021 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 ACSL4O60488 711 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 HSF2BPO75031 334 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 DAB1O75553 588 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 ALDH1A2O94788 518 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 EPN2O95208 641 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 TPM2P07951 284 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 GLI1P08151 1106 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 WASP42768 502 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 SLC11A2P49281 568 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 BPIFB4P59827 614 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 SPEM2Q0P670 501 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 EIF4HQ15056 248 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 TAF5Q15542 800 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 PLK5Q496M5 336 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 ANO6Q4KMQ2 910 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 FKBP15Q5T1M5 1219 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 CAVIN1Q6NZI2 390 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 RFWD3Q6PCD5 774 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 APTXQ7Z2E3 356 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 NOP9Q86U38 636 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 CHPFQ8IZ52 775 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 GPR161Q8N6U8 529 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 WFDC5Q8TCV5 224 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 IPO4Q8TEX9 1081 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 HMGB4Q8WW32 186 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 DDX1Q92499 740 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 AZIN2Q96A70 460 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 SLC2A13Q96QE2 648 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 FAM207AQ9NSI2 230 aaPredicted RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 CACNA2D2Q9NY47 1150 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
SPG11-216ENST00000559347 USP18Q9UMW8 372 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 CEP83Q9Y592 693 aa11.38□□□□□ -0.59
SPG11-216ENST00000559347 DOCK4Q8N1I0 1966 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 TRUB2O95900 331 aaKnown RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 MOCS2O96007 188 aaPredicted RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 GABRG2P18507 467 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 BCKDHBP21953 392 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 HLA-FP30511 346 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 P2RY2P41231 377 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 JAM2P57087 298 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 EIF4EBP2Q13542 120 aaPredicted RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 ENPP2Q13822 863 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 ELF2Q15723 593 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 USP39Q53GS9 565 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms