RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SNX10Q9Y5X0 201 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 DOCK4Q8N1I0 1966 aa11.9□□□□□ -0.5
SNX1-204ENST00000559061 ATG2BQ96BY7 2078 aa11.9□□□□□ -0.51
SNX1-204ENST00000559061 SIGLEC16A6NMB1 481 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
SNX1-204ENST00000559061 M0QYT0 321 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 RTN2O75298 545 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 ENDOD1O94919 500 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 ADCY5O95622 1261 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 NFATC1O95644 943 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CALB1P05937 261 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CHRNB1P11230 501 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 ADH5P11766 374 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 AOC1P19801 751 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CDC25BP30305 580 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 GGCXP38435 758 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CXCR3P49682 368 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 SULT1E1P49888 294 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 HDAC4P56524 1084 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CDK17Q00537 523 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CCINQ13939 588 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 SLC25A52Q3SY17 297 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 TMEM31Q5JXX7 168 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 PKN3Q6P5Z2 889 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 RFWD3Q6PCD5 774 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 Q6ZS52 159 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 TPGS1Q6ZTW0 290 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 TMEM139Q8IV31 216 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 ZNF683Q8IZ20 524 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 FBXL6Q8N531 539 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 WFDC5Q8TCV5 224 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 FAM3CQ92520 227 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CENPIQ92674 756 aaPredicted RBP11.89□□□□□ -0.51
SNX1-204ENST00000559061 GOLGA1Q92805 767 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 CLDN23Q96B33 292 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 MAGEB5Q9BZ81 275 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 THAP2Q9H0W7 228 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
SNX1-204ENST00000559061 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 DDIT4Q9NX09 232 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 PLK2Q9NYY3 685 aa11.89□□□□□ -0.51
SNX1-204ENST00000559061 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
SNX1-204ENST00000559061 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 SSU72P8A0A1W2PR75 194 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 SLC9A3R1O14745 358 aaPredicted RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 CAPN9O14815 690 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 CCP110O43303 1012 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 CACNG3O60359 315 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 ACSL4O60488 711 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 LATS1O95835 1130 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 EGFP01133 1207 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 DCNP07585 359 aaKnown RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 CISD3P0C7P0 127 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 PTPN9P43378 593 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 GALK1P51570 392 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 KPNA1P52294 538 aaPredicted RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 NME3Q13232 169 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 CYP4V2Q6ZWL3 525 aaPredicted RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 C14orf80Q86SX3 495 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 CPNE8Q86YQ8 564 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 FLCNQ8NFG4 579 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 BHMTQ93088 406 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 AZIN2Q96A70 460 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 VCPIP1Q96JH7 1222 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 LMLNQ96KR4 655 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 TRIM62Q9BVG3 475 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 SPTLC3Q9NUV7 552 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 LSM7Q9UK45 103 aaKnown RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 NDRG2Q9UN36 371 aaKnown RBP11.88□□□□□ -0.51
SNX1-204ENST00000559061 NEU3Q9UQ49 428 aa11.88□□□□□ -0.51
SNX1-204ENST00000559061 TMEM191CA6NGB0 347 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 FAM170BA6NMN3 283 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 NEDD8-MDP1E9PL57 170 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 K7EQS6 105 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 TULP3O75386 442 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 MOCS2O96007 188 aaPredicted RBP11.87□□□□□ -0.51
SNX1-204ENST00000559061 KRT3P12035 628 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 TYRP14679 529 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 CLCN5P51795 746 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 SNX16P57768 344 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 ATP11AP98196 1134 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 PPP2R5DQ14738 602 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 UBXN2BQ14CS0 331 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 SLC18A3Q16572 532 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 MS4A13Q5J8X5 152 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 ADGRF1Q5T601 910 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 DAB2IPQ5VWQ8 1189 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 NUGGCQ68CJ6 796 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 ALKBH5Q6P6C2 394 aaKnown RBP11.87□□□□□ -0.51
SNX1-204ENST00000559061 ZNF852Q6ZMS4 543 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 CNGA4Q8IV77 575 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms