RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 C1orf54Q8WWF1 131 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 CASP10Q92851 521 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 RNF25Q96BH1 459 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 ZDHHC7Q9NXF8 308 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 GMIPQ9P107 970 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 TMEM191CA6NGB0 347 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 TP73O15350 636 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 RTN3O95197 1032 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 F11P03951 625 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 CALB1P05937 261 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 RPL7AP62424 266 aaKnown RBP16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 GUCY1A3Q02108 690 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 PLD1Q13393 1074 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 SLMAPQ14BN4 828 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 KRT71Q3SY84 523 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 ANKRD54Q6NXT1 300 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 POTEHQ6S545 545 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 SRLQ86TD4 932 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 SCML4Q8N228 414 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 EXD1Q8NHP7 514 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 IPO4Q8TEX9 1081 aaKnown RBP16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 TLCD1Q96CP7 247 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 CORO1BQ9BR76 489 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 DCLK3Q9C098 648 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 CENPHQ9H3R5 247 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 CLDND1Q9NY35 253 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 IP6K2Q9UHH9 426 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 RSPH14Q9UHP6 348 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 SLC12A6Q9UHW9 1150 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 LCMT1Q9UIC8 334 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 ASB3Q9Y575 518 aa16.47■□□□□ 0.23
CDC42BPB-204ENST00000559043 A0A1W2PQH9 124 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 RARGP13631 454 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 GJA1P17302 382 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 RFC1P35251 1148 aaPredicted RBP16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 GSCP56915 257 aaPredicted RBP16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 PTK6Q13882 451 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 VEPH1Q14D04 833 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 PPP1R7Q15435 360 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 RARS2Q5T160 578 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 DAB2IPQ5VWQ8 1189 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 DENND2CQ68D51 928 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 GRASPQ7Z6J2 395 aaPredicted RBP16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 HOOK3Q86VS8 718 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 C3orf20Q8ND61 904 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 GRK7Q8WTQ7 553 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 FBXO32Q969P5 355 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 TCEAL4Q96EI5 215 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 TRMT2BQ96GJ1 504 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 ADAM33Q9BZ11 813 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 S1PR5Q9H228 398 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 FBXO44Q9H4M3 255 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 LRRC4CQ9HCJ2 640 aa16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 FEZ2Q9UHY8 353 aaPredicted RBP16.46■□□□□ 0.23
CDC42BPB-204ENST00000559043 MOSPD3O75425 235 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 SHBGP04278 402 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 ZDHHC11BP0C7U3 371 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 RALAP11233 206 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 IVDP26440 423 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 LLGL1Q15334 1064 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 FAM102AQ5T9C2 384 aaPredicted RBP16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 SYPL2Q5VXT5 272 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 BSPRYQ5W0U4 402 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 RHBDF2Q6PJF5 856 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 EMC1Q8N766 993 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 TMEM109Q9BVC6 243 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 EPN3Q9H201 632 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 COMMD8Q9NX08 183 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 DPP7Q9UHL4 492 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 NUDT5Q9UKK9 219 aa16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 NOVA2Q9UNW9 492 aaKnown RBP16.46■□□□□ 0.22
CDC42BPB-204ENST00000559043 C2orf16Q68DN1 1984 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 ZNF840PA6NDX5 716 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 SIGLEC16A6NMB1 481 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 FBXO21O94952 628 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 RHOP08100 348 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 PTPN2P17706 415 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 ITIH2P19823 946 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 HPDP32754 393 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 EPHA5P54756 1037 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 PITX1P78337 314 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 OGDHQ02218 1023 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 CALCOCO2Q13137 446 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLC29A2Q14542 456 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCNG2Q16589 344 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLC26A9Q7LBE3 791 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 ITIH5Q86UX2 942 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 MON1AQ86VX9 555 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 CMASQ8NFW8 434 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 ATL2Q8NHH9 583 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 ATG4AQ8WYN0 398 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 SMG7Q92540 1137 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms