RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 ANKRD20A3Q5VUR7 823 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 CES3Q6UWW8 571 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 UNC5AQ6ZN44 842 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 STRADAQ7RTN6 431 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 TBC1D1Q86TI0 1168 aaPredicted RBP10.98□□□□□ -0.65
CUX1-217ENST00000558836 FAM35AQ86V20 835 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 CDKL3Q8IVW4 592 aaPredicted RBP10.98□□□□□ -0.65
CUX1-217ENST00000558836 KIF2BQ8N4N8 673 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 LRRC8CQ8TDW0 803 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 TFB1MQ8WVM0 346 aaKnown RBP10.98□□□□□ -0.65
CUX1-217ENST00000558836 PTPRN2Q92932 1015 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 FAM111AQ96PZ2 611 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 NPY6RQ99463 290 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 SLC40A1Q9NP59 571 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
CUX1-217ENST00000558836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
CUX1-217ENST00000558836 NDC80O14777 642 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 CLGNO14967 610 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 USP12O75317 370 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 CPP00450 1065 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 IGHA2P01877 340 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 NOS2P35228 1153 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 GJA9P57773 515 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 CDHR3Q6ZTQ4 885 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 ECHDC2Q86YB7 292 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 RTP4Q96DX8 246 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 P2RY11Q96G91 374 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 PRDM12Q9H4Q4 367 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 XPNPEP3Q9NQH7 507 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 TMLHEQ9NVH6 421 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 DDIT4Q9NX09 232 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 SMG5Q9UPR3 1016 aaKnown RBP10.97□□□□□ -0.65
CUX1-217ENST00000558836 TTLL3Q9Y4R7 772 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 WDR27A2RRH5 827 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 FAM155AB1AL88 458 aaPredicted RBP10.97□□□□□ -0.65
CUX1-217ENST00000558836 TRIM49D1C9J1S8 452 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 RNF103O00237 685 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 LPXNO60711 386 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 SLC10A3P09131 477 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 UPP1Q16831 310 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 RSPH3Q86UC2 560 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 BANPQ8N9N5 519 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 SCAMP5Q8TAC9 235 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 ZNF75CPQ92670 426 aaPredicted RBP10.97□□□□□ -0.65
CUX1-217ENST00000558836 TTC17Q96AE7 1141 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 ADAM2Q99965 735 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 TRPM7Q96QT4 1865 aa10.97□□□□□ -0.65
CUX1-217ENST00000558836 CFAP69A5D8W1 941 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 EEF2KO00418 725 aaKnown RBP10.96□□□□□ -0.65
CUX1-217ENST00000558836 GCATO75600 419 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 CSH1P0DML2 217 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 CSH2P0DML3 217 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 DAOAP59103 153 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 MROH9Q5TGP6 573 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 MFSD14CQ5VZR4 134 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 LRRTM3Q86VH5 581 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 SLC44A1Q8WWI5 657 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 MYLPFQ96A32 169 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 SIGLEC10Q96LC7 697 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 QKIQ96PU8 341 aaKnown RBP eCLIP10.96□□□□□ -0.65
CUX1-217ENST00000558836 RTP3Q9BQQ7 232 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 SPC25Q9HBM1 224 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 KLHL14Q9P2G3 628 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 DCTN4Q9UJW0 460 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 STAP1Q9ULZ2 295 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 ARL2BPQ9Y2Y0 163 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 SCN10AQ9Y5Y9 1956 aa10.96□□□□□ -0.65
CUX1-217ENST00000558836 DAB1O75553 588 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 C1QAP02745 245 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 OR4Q2P0C623 313 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 NEFHP12036 1026 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 PSMB4P28070 264 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 PDK4Q16654 411 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 LACTB2Q53H82 288 aaPredicted RBP10.96□□□□□ -0.66
CUX1-217ENST00000558836 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 RFX8Q6ZV50 586 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 LRRC6Q86X45 466 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 MECRQ9BV79 373 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 NPHS2Q9NP85 383 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 SLC38A7Q9NVC3 462 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 SENP1Q9P0U3 644 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 ZNF236Q9UL36 1845 aa10.96□□□□□ -0.66
CUX1-217ENST00000558836 DGKIO75912 1065 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 ERCC2P18074 760 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 ADRA1BP35368 520 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 GMPRP36959 345 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 NR2C2P49116 596 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 PGFP49763 221 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 KCNJ2P63252 427 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 IRX4P78413 519 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 OTOAQ7RTW8 1153 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 NPWQ8N729 165 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 NT5C3BQ969T7 300 aa10.95□□□□□ -0.66
CUX1-217ENST00000558836 OLFM3Q96PB7 478 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms