RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ARHGEF4Q9NR80 690 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 NINJ2Q9NZG7 142 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-207ENST00000558763 PLXNA4Q9HCM2 1894 aa13.42□□□□□ -0.26
SMAD3-207ENST00000558763 C2CD2LO14523 706 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TMEM63AO94886 807 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TTC4O95801 387 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 MYZAPP0CAP1 466 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FGFR3P22607 806 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 BMP8BP34820 402 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 SLC5A3P53794 718 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 DEUP1Q05D60 604 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 NME3Q13232 169 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 SLC39A12Q504Y0 691 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FAM76AQ8TAV0 307 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 SLC7A14Q8TBB6 771 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 EDEM1Q92611 657 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FOXP3Q9BZS1 431 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 PCDHA11Q9Y5I1 949 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 SYNJ2BP-COX16A0A087WUM0 186 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 BCLAF3A2AJT9 711 aaKnown RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 HMGB1P1B2RPK0 211 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FAM72CH0Y354 149 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TBC1D4O60343 1298 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 VNN2O95498 520 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 EFEMP2O95967 443 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 NCAM1P13591 858 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 AMPD1P23109 780 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 DNAJB2P25686 324 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 ADRA1BP35368 520 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 DPYSQ14117 519 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 KYNUQ16719 465 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TNFAIP8L3Q5GJ75 292 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FAM72AQ5TYM5 149 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 AGBL2Q5U5Z8 902 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 BSPRYQ5W0U4 402 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FAM72DQ6L9T8 149 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 C4orf50Q6ZRC1 276 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 BEND5Q7L4P6 421 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TAC4Q86UU9 113 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 FAM72BQ86X60 149 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 SPATA2LQ8IUW3 424 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 RNF139Q8WU17 664 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 RSAD2Q8WXG1 361 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TLCD1Q96CP7 247 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 RBM15Q96T37 977 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 WDR83Q9BRX9 315 aaKnown RBP13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TTPALQ9BTX7 342 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 DTLQ9NZJ0 730 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 COX16Q9P0S2 106 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 HEY1Q9Y5J3 304 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 TRANK1O15050 2925 aa13.41□□□□□ -0.26
SMAD3-207ENST00000558763 SHOX2O60902 331 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 ACSL3O95573 720 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 SOD2P04179 222 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 RBL1P28749 1068 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 BMPR1AP36894 532 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 CXCR3P49682 368 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 SKOR1P84550 965 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 DARS2Q6PI48 645 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 PRSS55Q6UWB4 352 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 RSPO2Q6UXX9 243 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 SCD5Q86SK9 330 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 TTC9BQ8N6N2 239 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 UHMK1Q8TAS1 419 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 DQX1Q8TE96 717 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 FUBP3Q96I24 572 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 CERS4Q9HA82 394 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 ALG13Q9NP73 1137 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 DDIT4Q9NX09 232 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 RRN3Q9NYV6 651 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
SMAD3-207ENST00000558763 MYO18AQ92614 2054 aaKnown RBP13.4□□□□□ -0.26
SMAD3-207ENST00000558763 CARNS1A5YM72 827 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 CAPN9O14815 690 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 DCLK1O15075 740 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 MFSD11O43934 449 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 GPR15P49685 360 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 AIF1P55008 147 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 CTXN3Q4LDR2 81 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 ZNF280DQ6N043 979 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 HOOK3Q86VS8 718 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 PPIL6Q8IXY8 311 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 VPS52Q8N1B4 723 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 STKLD1Q8NE28 680 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms