RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 IPO4Q8TEX9 1081 aaKnown RBP16.14■□□□□ 0.17
CSHL1-208ENST00000558609 UCMAQ8WVF2 138 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 RLN3Q8WXF3 142 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 TMA16Q96EY4 203 aaKnown RBP16.14■□□□□ 0.17
CSHL1-208ENST00000558609 SPACA7Q96KW9 195 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 RTKNQ9BST9 563 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 TRIM62Q9BVG3 475 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 VPS45Q9NRW7 570 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 DNAJC12Q9UKB3 198 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 PCDHGC3Q9UN70 934 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 NAALADL1Q9UQQ1 740 aa16.14■□□□□ 0.17
CSHL1-208ENST00000558609 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 KCNJ18B7U540 433 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 E5RJQ4 531 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 FOXN3O00409 490 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 ZBTB24O43167 697 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 TIMM44O43615 452 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 TSPAN3O60637 253 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 HOXD9P28356 352 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 SLC11A2P49281 568 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 PTK2Q05397 1052 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 NNTQ13423 1086 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 ENPP2Q13822 863 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 KCNJ12Q14500 433 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 EIF4HQ15056 248 aaKnown RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 E2F5Q15329 346 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 SF3A2Q15428 464 aaKnown RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 CCDC6Q16204 474 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 HSP90AA4PQ58FG1 418 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 MPP7Q5T2T1 576 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 KIAA1211LQ6NV74 962 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 WDTC1Q8N5D0 677 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 ENOX1Q8TC92 643 aaKnown RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 DQX1Q8TE96 717 aaKnown RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 FAM149B1Q96BN6 582 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 SERPINB11Q96P15 392 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 LHX5Q9H2C1 402 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 ELOVL2Q9NXB9 296 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 CACNA2D2Q9NY47 1150 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 THAP10Q9P2Z0 257 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 MBD1Q9UIS9 605 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
CSHL1-208ENST00000558609 TLR6Q9Y2C9 796 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 STON1Q9Y6Q2 735 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 THADAQ6YHU6 1953 aa16.13■□□□□ 0.17
CSHL1-208ENST00000558609 PLXND1Q9Y4D7 1925 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 CFAP47Q6ZTR5 3102 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 WASH3PC4AMC7 463 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 SLC30A4O14863 429 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 IRAK2O43187 625 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 GDF9O60383 454 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 ACSL4O60488 711 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 CAVIN2O95810 425 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 EEF1GP26641 437 aaKnown RBP16.12■□□□□ 0.17
CSHL1-208ENST00000558609 CLCN1P35523 988 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 LIMK1P53667 647 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 YWHAZP63104 245 aaKnown RBP16.12■□□□□ 0.17
CSHL1-208ENST00000558609 CREB5Q02930 508 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 KCNMA1Q12791 1236 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 PDCLQ13371 301 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 TCP11X2Q5H9J9 407 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 SPDYCQ5MJ68 293 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 PIK3R6Q5UE93 754 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 RNF43Q68DV7 783 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 LPCAT2Q7L5N7 544 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 FAM71AQ8IYT1 594 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 FRMD1Q8N878 549 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 C12orf50Q8NA57 414 aaPredicted RBP16.12■□□□□ 0.17
CSHL1-208ENST00000558609 SLC39A13Q96H72 371 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 FCRL2Q96LA5 508 aaPredicted RBP16.12■□□□□ 0.17
CSHL1-208ENST00000558609 POPDC2Q9HBU9 364 aa16.12■□□□□ 0.17
CSHL1-208ENST00000558609 CAPN9O14815 690 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 MAP3K13O43283 966 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 ZNF217O75362 1048 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 NDUFV2P19404 249 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 AASDHQ4L235 1098 aaPredicted RBP16.11■□□□□ 0.17
CSHL1-208ENST00000558609 FAM133BQ5BKY9 247 aaKnown RBP16.11■□□□□ 0.17
CSHL1-208ENST00000558609 SYPL2Q5VXT5 272 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 TMEM215Q68D42 235 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 NADSYN1Q6IA69 706 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 KIAA0907Q7Z7F0 614 aaPredicted RBP16.11■□□□□ 0.17
CSHL1-208ENST00000558609 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.11■□□□□ 0.17
CSHL1-208ENST00000558609 PPP1R13BQ96KQ4 1090 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 CPXM1Q96SM3 734 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 DDX50Q9BQ39 737 aaKnown RBP16.11■□□□□ 0.17
CSHL1-208ENST00000558609 SMOC1Q9H4F8 434 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 CALCOCO1Q9P1Z2 691 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 NFE2L3Q9Y4A8 694 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 RAD54BQ9Y620 910 aa16.11■□□□□ 0.17
CSHL1-208ENST00000558609 GOLGA6L7A0A1B0GV03 622 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 GOLGA6L22H0YM25 854 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 IGLV3-25P01717 112 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 GLI1P08151 1106 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 HLA-FP30511 346 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 SLC6A4P31645 630 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 KRT9P35527 623 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 IL12RB1P42701 662 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms