RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ADGRF1Q5T601 910 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 PPP1R2P3Q6NXS1 205 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 Q6ZS52 159 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 SYNPOQ8N3V7 929 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 DDI1Q8WTU0 396 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 AZIN2Q96A70 460 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 DDX50Q9BQ39 737 aaKnown RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 ARHGEF4Q9NR80 690 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 DNAJC17Q9NVM6 304 aaKnown RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 DEC1Q9P2X7 70 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 RAPGEFL1Q9UHV5 662 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 STOML2Q9UJZ1 356 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 TMEM59LQ9UK28 342 aa12.84□□□□□ -0.35
SMAD3-205ENST00000558428 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
SMAD3-205ENST00000558428 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 KAT7O95251 611 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 GJB6O95452 261 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 PENKP01210 267 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 SERPING1P05155 500 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 SLC2A3P11169 496 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 KRT3P12035 628 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 TFE3P19532 575 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 CCR1P32246 355 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 MESP2Q0VG99 397 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 MTAPQ13126 283 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 SLC25A52Q3SY17 297 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 MPPE1Q53F39 396 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 FYB2Q5VWT5 728 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 HGSNATQ68CP4 663 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 NADSYN1Q6IA69 706 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 GRAMD4Q6IC98 578 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 TRNP1Q6NT89 227 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 RFWD3Q6PCD5 774 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 ARCQ7LC44 396 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 C1orf210Q8IVY1 113 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 MCOLN2Q8IZK6 566 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 EMC1Q8N766 993 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 ATP6V0D2Q8N8Y2 350 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 C3orf20Q8ND61 904 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 PRSS33Q8NF86 280 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 EZH1Q92800 747 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 P2RY11Q96G91 374 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 CFAP57Q96MR6 1250 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 TBCBQ99426 244 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 NPY6RQ99463 290 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 IER2Q9BTL4 223 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 ANP32EQ9BTT0 268 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 KCNH6Q9H252 994 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
SMAD3-205ENST00000558428 XPO7Q9UIA9 1087 aaKnown RBP12.83□□□□□ -0.36
SMAD3-205ENST00000558428 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 TRIM24O15164 1050 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 LAMTOR5O43504 91 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 RNF40O75150 1001 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 PLEKP08567 350 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-205ENST00000558428 GZMAP12544 262 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 PDGFRAP16234 1089 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 ABCB4P21439 1286 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 SDC4P31431 198 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 SLC6A4P31645 630 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 GRIA2P42262 883 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 DGKGP49619 791 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 SEC13P55735 322 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 DEUP1Q05D60 604 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 GAS6Q14393 721 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 FAM133BQ5BKY9 247 aaKnown RBP12.82□□□□□ -0.36
SMAD3-205ENST00000558428 PIK3R6Q5UE93 754 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 OTUD1Q5VV17 481 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-205ENST00000558428 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 SND1Q7KZF4 910 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMAD3-205ENST00000558428 DNAAF5Q86Y56 855 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 JOSD2Q8TAC2 188 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 NT5C3BQ969T7 300 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 TMA16Q96EY4 203 aaKnown RBP12.82□□□□□ -0.36
SMAD3-205ENST00000558428 PGAP3Q96FM1 320 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-205ENST00000558428 VCPIP1Q96JH7 1222 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 BTN2A3PQ96KV6 586 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 PIGVQ9NUD9 493 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 CALCOCO1Q9P1Z2 691 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 ADAMTS1Q9UHI8 967 aa12.82□□□□□ -0.36
SMAD3-205ENST00000558428 TYW5A2RUC4 315 aaKnown RBP12.81□□□□□ -0.36
SMAD3-205ENST00000558428 C2CD4BA6NLJ0 364 aa12.81□□□□□ -0.36
SMAD3-205ENST00000558428 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
SMAD3-205ENST00000558428 KCNU1A8MYU2 1149 aa12.81□□□□□ -0.36
SMAD3-205ENST00000558428 K7EQS6 105 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms