RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CDKL2Q92772 493 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 NTAN1Q96AB6 310 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 TTC17Q96AE7 1141 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 KLHL29Q96CT2 875 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 PGAP3Q96FM1 320 aaPredicted RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 ANKRD27Q96NW4 1050 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 PPP1R2P1Q96PQ5 205 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 CSPG4P5Q96PW8 444 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 SLC2A13Q96QE2 648 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 OSMRQ99650 979 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 EBNA1BP2Q99848 306 aaKnown RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 SIKE1Q9BRV8 207 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 DHX35Q9H5Z1 703 aaKnown RBP8.6□□□□□ -1.03
SPG11-209ENST00000558253 MANSC1Q9H8J5 431 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 ECT2Q9H8V3 914 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 LRRC4Q9HBW1 653 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 CNGB3Q9NQW8 809 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 FZD10Q9ULW2 581 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 HEY1Q9Y5J3 304 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 PTCH2Q9Y6C5 1203 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 RALGAPA2Q2PPJ7 1873 aa8.6□□□□□ -1.03
SPG11-209ENST00000558253 PLXNB2O15031 1838 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 A0A1W2PPM1 405 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 MAGEB16A2A368 324 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 FAM159BA6NKW6 160 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 TRAFD1O14545 582 aaPredicted RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 CYB561D2O14569 222 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 COPEO14579 308 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 PSMD3O43242 534 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 DNAJC6O75061 913 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 DUSP11O75319 330 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 SPAG7O75391 227 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 ALDH1A2O94788 518 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 UBOX5O94941 541 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 APRTP07741 180 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 FAM200BP0CF97 657 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 EZRP15311 586 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 MX2P20592 715 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 PCSK1P29120 753 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 CYP2C18P33260 490 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 NEK3P51956 506 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 NKX3-2P78367 333 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 MRPS5P82675 430 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 LAPTM4AQ15012 233 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 PAFAH1B3Q15102 231 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 KCTD19Q17RG1 926 aaPredicted RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 ARL13BQ3SXY8 428 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 KBTBD12Q3ZCT8 623 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 FAM133BQ5BKY9 247 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 PPP6R3Q5H9R7 873 aaPredicted RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 UBXN11Q5T124 520 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 SH3PXD2AQ5TCZ1 1133 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 STEAP4Q687X5 459 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 LRRC8BQ6P9F7 803 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 NPNTQ6UXI9 565 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 KYAT3Q6YP21 454 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 ECHDC2Q86YB7 292 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 C4orf33Q8N1A6 199 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 SIX6OS1Q8N1H7 587 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 SLC2A14Q8TDB8 520 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 TCP10LQ8TDR4 215 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 DNAJB3Q8WWF6 145 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 HTR3CQ8WXA8 447 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 ATP2A3Q93084 1043 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 WNT8BQ93098 351 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 SPATA13Q96N96 652 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 OLFM3Q96PB7 478 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 PPP1R16BQ96T49 567 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 NPY6RQ99463 290 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 VAT1Q99536 393 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 APBA2Q99767 749 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 NXF3Q9H4D5 531 aaKnown RBP8.59□□□□□ -1.03
SPG11-209ENST00000558253 FAM96AQ9H5X1 160 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 POPDC2Q9HBU9 364 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 ABCF3Q9NUQ8 709 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 FAM49BQ9NUQ9 324 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 LIMD1Q9UGP4 676 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 TRHDEQ9UKU6 1024 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 DSEQ9UL01 958 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 CDH9Q9ULB4 789 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 CHMP2BQ9UQN3 213 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 IPPQ9Y573 584 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 PCDHA11Q9Y5I1 949 aa8.59□□□□□ -1.03
SPG11-209ENST00000558253 TCRBV7S3A2A0A539 114 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 I3L4J1 428 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 GPR182O15218 404 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 GFRA3O60609 400 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 GRAP2O75791 330 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 IGHA2P01877 340 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 MYL3P08590 195 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 PDGFRBP09619 1106 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 LCP1P13796 627 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 AKR1A1P14550 325 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 CCND1P24385 295 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms