RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 LGMNQ99538 433 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 ELF4Q99607 663 aaPredicted RBP5.45□□□□□ -1.54
SPG11-208ENST00000558155 SLC2A11Q9BYW1 496 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 CIPCQ9C0C6 399 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 DPEP3Q9H4B8 488 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 CYLDQ9NQC7 956 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 OLFML3Q9NRN5 406 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 STK17AQ9UEE5 414 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SUN2Q9UH99 717 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SCML2Q9UQR0 700 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 NCKAP1Q9Y2A7 1128 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 NME7Q9Y5B8 376 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 COL6A6A6NMZ7 2263 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 PTPRQQ9UMZ3 2332 aa5.45□□□□□ -1.54
SPG11-208ENST00000558155 SETXQ7Z333 2677 aaKnown RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 A0A1W2PPC4 97 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 RNF223E7ERA6 249 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 BRINP1O60477 761 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 STC2O76061 302 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CLSTN1O94985 981 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 WISP1O95388 367 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PENKP01210 267 aaPredicted RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 C6P13671 934 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 P4HA1P13674 534 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 GLDCP23378 1020 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PRKCHP24723 683 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TXLNAP40222 546 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 ARRB1P49407 418 aaPredicted RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 MAP3K7CLP57077 242 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TMPRSS3P57727 454 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 MYL6P60660 151 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TLE3Q04726 772 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PDE4CQ08493 712 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 DNAJC3Q13217 504 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CAMK2GQ13555 558 aaPredicted RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 BMT2Q1RMZ1 405 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D25Q3MII6 688 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TTC31Q49AM3 519 aaPredicted RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 SLC45A4Q5BKX6 768 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 ZNF667Q5HYK9 610 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 C10orf120Q5SQS8 335 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PRAMEF14Q5SWL7 426 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 SWT1Q5T5J6 900 aaKnown RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 FYB2Q5VWT5 728 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 KIAA0895LQ68EN5 471 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PCSK4Q6UW60 755 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 ACOT1Q86TX2 421 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 FAM35AQ86V20 835 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 GATAD2AQ86YP4 633 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CBWD2Q8IUF1 395 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CCDC65Q8IXS2 484 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 FUKQ8N0W3 1084 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 LSMEM2Q8N112 164 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CRYBG2Q8N1P7 616 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 ZNF276Q8N554 614 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TTC13Q8NBP0 860 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 ZNF248Q8NDW4 579 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 SAP25Q8TEE9 199 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 GANCQ8TET4 914 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 DDI1Q8WTU0 396 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TSC1Q92574 1164 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 GOLGA1Q92805 767 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CCDC127Q96BQ5 260 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 DNAJC19Q96DA6 116 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PIWIL1Q96J94 861 aaKnown RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 ZNF578Q96N58 590 aaPredicted RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 SMOQ99835 787 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 TMUB1Q9BVT8 246 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CSNK1G1Q9HCP0 422 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 KRT82Q9NSB4 513 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 PANK4Q9NVE7 773 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 HSPBP1Q9NZL4 362 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 CLCA2Q9UQC9 943 aa5.44□□□□□ -1.54
SPG11-208ENST00000558155 COL5A1P20908 1838 aaPredicted RBP5.44□□□□□ -1.54
SPG11-208ENST00000558155 CKAP5Q14008 2032 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 A0A1W2PQH9 124 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 LRRC72A6NJI9 287 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 SLC28A2O43868 658 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 RNASEH1O60930 286 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 BEST1O76090 585 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 MT-CO3P00414 261 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 KLKB1P03952 638 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 ATP5BP06576 529 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 FAM200BP0CF97 657 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CKMT2P17540 419 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CD38P28907 300 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CORO1AP31146 461 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 SLC19A1P41440 591 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 ACADVLP49748 655 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 PGFP49763 221 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 CASP5P51878 434 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 AP3M2P53677 418 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 PCBP4P57723 403 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 RPS14P62263 151 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 SNRPFP62306 86 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 GRIN1Q05586 938 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 PSMD6Q15008 389 aa5.43□□□□□ -1.54
SPG11-208ENST00000558155 SNRNP35Q16560 246 aaKnown RBP5.43□□□□□ -1.54
SPG11-208ENST00000558155 FNDC3BQ53EP0 1204 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms