RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TSSK4Q6SA08 328 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 BEND5Q7L4P6 421 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 SLC26A9Q7LBE3 791 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 XYLT1Q86Y38 959 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 CARNMT1Q8N4J0 409 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 CCDC33Q8N5R6 958 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 UCMAQ8WVF2 138 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 ATRIPQ8WXE1 791 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 BAP1Q92560 729 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 TMA16Q96EY4 203 aaKnown RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 SLC2A13Q96QE2 648 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 EDEM3Q9BZQ6 932 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 TRIM5Q9C035 493 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 DEF6Q9H4E7 631 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 HAUS4Q9H6D7 363 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 FBRSL1Q9HCM7 1045 aaKnown RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPG11-207ENST00000558138 ZNHIT6Q9NWK9 470 aaKnown RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 RRN3Q9NYV6 651 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 DLGAP2Q9P1A6 1054 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 BCCIPQ9P287 314 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPG11-207ENST00000558138 LUC7L2Q9Y383 392 aaKnown RBP9.33□□□□□ -0.92
SPG11-207ENST00000558138 MYOFQ9NZM1 2061 aa9.33□□□□□ -0.92
SPG11-207ENST00000558138 GOLGA6L7A0A1B0GV03 622 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SHISA7A6NL88 538 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 H0Y626 953 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 CACNG3O60359 315 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 GREM1O60565 184 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 KLF8O95600 359 aaPredicted RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 CYP1A1P04798 512 aaPredicted RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 FYNP06241 537 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SP9P0CG40 484 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 KRT3P12035 628 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SKILP12757 684 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 MMP8P22894 467 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SCNN1AP37088 669 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 GABRB2P47870 512 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 NRLP54845 237 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 PITX1P78337 314 aaPredicted RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 ZBED6P86452 979 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 ATP11AP98196 1134 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SATB1Q01826 763 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 CENPCQ03188 943 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 TCF15Q12870 199 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 CDH18Q13634 790 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 FIGNQ5HY92 759 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 RABGAP1LQ5R372 815 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SPECC1LQ69YQ0 1117 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 TRMT11Q7Z4G4 463 aaKnown RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 ANKS1BQ7Z6G8 1248 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 MFN1Q8IWA4 741 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 LGI2Q8N0V4 545 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 PGBD3Q8N328 593 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 CPXM2Q8N436 756 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 EMC1Q8N766 993 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 TERB1Q8NA31 727 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 HJURPQ8NCD3 748 aaPredicted RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 TSTD1Q8NFU3 115 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 BTN2A3PQ96KV6 586 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 FCRL2Q96LA5 508 aaPredicted RBP9.32□□□□□ -0.92
SPG11-207ENST00000558138 CFAP57Q96MR6 1250 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 HHIPQ96QV1 700 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 PCDHB18PQ96TA0 734 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 ANP32EQ9BTT0 268 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 CIPCQ9C0C6 399 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 SIK2Q9H0K1 926 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 WDCPQ9H6R7 721 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 MARK1Q9P0L2 795 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 FBXO4Q9UKT5 387 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 F5P12259 2224 aa9.32□□□□□ -0.92
SPG11-207ENST00000558138 A0A1W2PQJ5 194 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 TRIM24O15164 1050 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ALDH1A2O94788 518 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 GJB6O95452 261 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 F9P00740 461 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 IGLV3-27P01718 113 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 UNGP13051 313 aaPredicted RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 PDGFRAP16234 1089 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 TACR2P21452 398 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 CASP14P31944 242 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 RDXP35241 583 aaKnown RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 WASP42768 502 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 TNFRSF4P43489 277 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 MRPS21P82921 87 aaKnown RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 NHLH1Q02575 133 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
SPG11-207ENST00000558138 MTA1Q13330 715 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 FZD5Q13467 585 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 DMC1Q14565 340 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 E2F5Q15329 346 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 GAB4Q2WGN9 574 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ARL13BQ3SXY8 428 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 SLC25A52Q3SY17 297 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 EOGTQ5NDL2 527 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 FYB2Q5VWT5 728 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 ACAD10Q6JQN1 1059 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 TMC6Q7Z403 805 aa9.31□□□□□ -0.92
SPG11-207ENST00000558138 IRF2BP2Q7Z5L9 587 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms