RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SLITRK1Q96PX8 696 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 MRPL45Q9BRJ2 306 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 FGFBP2Q9BYJ0 223 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 TRIM55Q9BYV6 548 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 ZNF518BQ9C0D4 1074 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 DPEP3Q9H4B8 488 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 PCIF1Q9H4Z3 704 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 FAM124BQ9H5Z6 455 aaPredicted RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 MRPL44Q9H9J2 332 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 IL21RQ9HBE5 538 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 SPHK2Q9NRA0 654 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 INTS13Q9NVM9 706 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 FANCLQ9NW38 375 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 EHD2Q9NZN4 543 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 DEC1Q9P2X7 70 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 SUSD2Q9UGT4 822 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 EXOC7Q9UPT5 735 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 APOBEC2Q9Y235 224 aaKnown RBP6.2□□□□□ -1.42
VPS33B-207ENST00000557470 DYRK1BQ9Y463 629 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 RAD54BQ9Y620 910 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 CEP192Q8TEP8 1941 aa6.2□□□□□ -1.42
VPS33B-207ENST00000557470 URB1O60287 2271 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 EIF4E1BA6NMX2 242 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 MEI4A8MW99 385 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 PRRT4C9JH25 899 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 NEDD8-MDP1E9PL57 170 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 CLDN5O00501 218 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GREM1O60565 184 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 NDUFS2O75306 463 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GCNT3O95395 438 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 IRF1P10914 325 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GNSP15586 552 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 PTPN1P18031 435 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 YWHAQP27348 245 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 LONP1P36776 959 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GNL1P36915 607 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 FOXD4Q12950 439 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 PREPLQ4J6C6 727 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 WDR45BQ5MNZ6 344 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SYCP2LQ5T4T6 812 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GRAMD4Q6IC98 578 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 KIAA1324Q6UXG2 1013 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 USP49Q70CQ1 688 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 TMPRSS7Q7RTY8 843 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GLRX5Q86SX6 157 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 CHPFQ8IZ52 775 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SYCP3Q8IZU3 236 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SVOPQ8N4V2 548 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 ZCCHC9Q8N567 271 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SCAMP5Q8TAC9 235 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 BAHD1Q8TBE0 780 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 FBXO32Q969P5 355 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 DNAJC19Q96DA6 116 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 ANKRD36BP1Q96IX9 119 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 EPSTI1Q96J88 318 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 MRGPRX1Q96LB2 322 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 MMS19Q96T76 1030 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 KIF2CQ99661 725 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 GABRG3Q99928 467 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 B3GNT5Q9BYG0 378 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 TRIM9Q9C026 710 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 ZDHHC5Q9C0B5 715 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 ELOVL4Q9GZR5 314 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SNX25Q9H3E2 840 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 DNAJC17Q9NVM6 304 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 CACNA2D2Q9NY47 1150 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 DKK4Q9UBT3 224 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SEL1LQ9UBV2 794 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 CHORDC1Q9UHD1 332 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 FNDC3AQ9Y2H6 1198 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 SH3BP1Q9Y3L3 701 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 STARD13Q9Y3M8 1113 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
VPS33B-207ENST00000557470 HRH3Q9Y5N1 445 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 ZNF462Q96JM2 2506 aa6.19□□□□□ -1.42
VPS33B-207ENST00000557470 A0A1B0GTW7 788 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 WASH3PC4AMC7 463 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 H3BQV1 296 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 CACNG3O60359 315 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 CILPO75339 1184 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TACC1O75410 805 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 PRPF6O94906 941 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 RTN3O95197 1032 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 BMP15O95972 392 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TNNC2P02585 160 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 PRB1P04280 392 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 ATXN1LP0C7T5 689 aaKnown RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 ZDHHC11BP0C7U3 371 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TYRP14679 529 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GAP43P17677 238 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 MZF1P28698 734 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-207ENST00000557470 CD6P30203 668 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 PGFP49763 221 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 TUBP50607 506 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 SLC5A3P53794 718 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 GYS2P54840 703 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 BNC1Q01954 994 aa6.18□□□□□ -1.42
VPS33B-207ENST00000557470 CYP4F3Q08477 520 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms