RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 COL26A1Q96A83 441 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 PCED1AQ9H1Q7 454 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 LHX5Q9H2C1 402 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 PNPLA8Q9NP80 782 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 RASAL2Q9UJF2 1139 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 AGO1Q9UL18 857 aaKnown RBP9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 ANKRD6Q9Y2G4 727 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 ZNF510Q9Y2H8 683 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 TMEM131Q92545 1883 aa9.47□□□□□ -0.89
HNRNPC-227ENST00000556897 ASH1LQ9NR48 2969 aaKnown RBP9.46□□□□□ -0.89
HNRNPC-227ENST00000556897 H0Y8X5 98 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 SPTLC2O15270 562 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 TIMM44O43615 452 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 STX6O43752 255 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 PCDHGA12O60330 932 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 SEMA4FO95754 770 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 CYBBP04839 570 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 TRIM21P19474 475 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 ITPKBP27987 946 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 PIK3CAP42336 1068 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 ABCG1P45844 678 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 GRIA4P48058 902 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 CCT8P50990 548 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 ARID5AQ03989 594 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 INCA1Q0VD86 236 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 CAMK2GQ13555 558 aaPredicted RBP9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 KCNT1Q5JUK3 1230 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 SHC4Q6S5L8 630 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF276Q8N554 614 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 OR2T3Q8NH03 318 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 GOLGA5Q8TBA6 731 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 CYB5D2Q8WUJ1 264 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 TAF4BQ92750 862 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 IGSF8Q969P0 613 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 BIRC7Q96CA5 298 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 UBL7Q96S82 380 aaPredicted RBP9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 CDK5RAP1Q96SZ6 601 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 DCLK3Q9C098 648 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 TM9SF3Q9HD45 589 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 MARCH2Q9P0N8 246 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 USP3Q9Y6I4 520 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 SHROOM3Q8TF72 1996 aa9.46□□□□□ -0.9
HNRNPC-227ENST00000556897 SLC12A8A0AV02 714 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 PLK4O00444 970 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 POLR2DO15514 142 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 TSPAN3O60637 253 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 FSBPO95073 299 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 HLA-DRAP01903 254 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 CD58P19256 250 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 CD27P26842 260 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 HLA-FP30511 346 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 CLDN6P56747 220 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 CUL4BQ13620 913 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 E2F5Q15329 346 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 FNDC3BQ53EP0 1204 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 RSRC2Q7L4I2 434 aaKnown RBP9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 CPXM2Q8N436 756 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 ENGASEQ8NFI3 743 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 ARID3AQ99856 593 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 ORAI3Q9BRQ5 295 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 MFRPQ9BY79 579 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 DUSP16Q9BY84 665 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 SLC2A11Q9BYW1 496 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 BTBD1Q9H0C5 482 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 TMEM245Q9H330 911 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 ZSCAN16Q9H4T2 348 aaPredicted RBP9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 OSGEPQ9NPF4 335 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 DMAC2Q9NW81 257 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 FTSJ1Q9UET6 329 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 STRIP2Q9ULQ0 834 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 PLA2G4CQ9UP65 541 aa9.45□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF462Q96JM2 2506 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 PVALEFA0A1B0GWK0 134 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 CBX4O00257 560 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 IKBKBO14920 756 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 PPP6R2O75170 966 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 C1QL1O75973 258 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 NR3C1P04150 777 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 JUPP14923 745 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 HOXD9P28356 352 aaPredicted RBP9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 CTSKP43235 329 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 AFMP43652 599 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 BCAT1P54687 386 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 RPS14P62263 151 aaKnown RBP9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 SEMG2Q02383 582 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 STK4Q13043 487 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 INAVAQ3KP66 663 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF394Q53GI3 561 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 PRAMEF14Q5SWL7 426 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 C1orf220Q5T0J3 134 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 CEP135Q66GS9 1140 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 ADAT2Q7Z6V5 191 aaKnown RBP9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 TMPRSS12Q86WS5 348 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 GATAD2AQ86YP4 633 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms