RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 MAMLD1Q13495 774 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 RAB6CQ53S08 254 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 TMEM31Q5JXX7 168 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 PPP1R15BQ5SWA1 713 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 NADSYN1Q6IA69 706 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 ARCQ7LC44 396 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 C12orf40Q86WS4 652 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 RNF34Q969K3 372 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 NT5C3BQ969T7 300 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 MSANTD3Q96H12 275 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 BBS2Q9BXC9 721 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 RAB6CQ9H0N0 254 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 LTB4R2Q9NPC1 389 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 SPTLC3Q9NUV7 552 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 RRN3Q9NYV6 651 aa18.17■□□□□ 0.5
SHMT2-225ENST00000556798 MAN2B1O00754 1011 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 ACSL4O60488 711 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 TSPAN3O60637 253 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 GPR37L1O60883 481 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 LATS1O95835 1130 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 SDC4P31431 198 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 SLC6A4P31645 630 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 CHKAP35790 457 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 SLC11A2P49281 568 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 MLLT6P55198 1093 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-225ENST00000556798 GAD2Q05329 585 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 DEUP1Q05D60 604 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 SLC18A3Q16572 532 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 CCDC14Q49A88 953 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 FAM133BQ5BKY9 247 aaKnown RBP18.16■□□□□ 0.5
SHMT2-225ENST00000556798 SH3PXD2AQ5TCZ1 1133 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 PLEKHA7Q6IQ23 1121 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 RFWD3Q6PCD5 774 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 FAM217AQ8IXS0 508 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 CPXM2Q8N436 756 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 NAT16Q8N8M0 369 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 TRIM11Q96F44 468 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 CCDC42Q96M95 316 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 THAP2Q9H0W7 228 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 GRPEL1Q9HAV7 217 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 PARVAQ9NVD7 372 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHMT2-225ENST00000556798 PLK2Q9NYY3 685 aa18.16■□□□□ 0.5
SHMT2-225ENST00000556798 HOXC11O43248 304 aaPredicted RBP18.15■□□□□ 0.5
SHMT2-225ENST00000556798 MYBL1P10243 752 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 TYRP14679 529 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 CCR1P32246 355 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 RDXP35241 583 aaKnown RBP18.15■□□□□ 0.5
SHMT2-225ENST00000556798 OPRD1P41143 372 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 SLC6A11P48066 632 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 SGSHP51688 502 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 OGDHQ02218 1023 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 PPP2R5DQ14738 602 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 ADGRF1Q5T601 910 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 BMP8AQ7Z5Y6 402 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 FBXL6Q8N531 539 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 PJA1Q8NG27 643 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 PGAP3Q96FM1 320 aaPredicted RBP18.15■□□□□ 0.5
SHMT2-225ENST00000556798 PACSIN1Q9BY11 444 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 ANLNQ9NQW6 1124 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 MARK1Q9P0L2 795 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 STOML2Q9UJZ1 356 aa18.15■□□□□ 0.5
SHMT2-225ENST00000556798 ZNF318Q5VUA4 2279 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 DOCK4Q8N1I0 1966 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 ANKRD62A6NC57 917 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 GOLGA6L3A6NEY3 463 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 FAM170BA6NMN3 283 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 KCNU1A8MYU2 1149 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 PRR33A8MZF0 331 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 CCP110O43303 1012 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 PI15O43692 258 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 DCNP07585 359 aaKnown RBP18.14■□□□□ 0.49
SHMT2-225ENST00000556798 GGCXP38435 758 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 PTPN9P43378 593 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 CXCR3P49682 368 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 GALK1P51570 392 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 GALCP54803 685 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 AMPD2Q01433 879 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 KDSRQ06136 332 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 FYB2Q5VWT5 728 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 RAP1GAP2Q684P5 730 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 SND1Q7KZF4 910 aaKnown RBP eCLIP18.14■□□□□ 0.493e-7■□□□□ 11.2
SHMT2-225ENST00000556798 BNIPLQ7Z465 357 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-225ENST00000556798 CHSY1Q86X52 802 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 FAM131BQ86XD5 332 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 CCDC105Q8IYK2 499 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 ATP6V0D2Q8N8Y2 350 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 DDI1Q8WTU0 396 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 FAM172AQ8WUF8 416 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 CD101Q93033 1021 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 AZIN2Q96A70 460 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 ARHGEF26Q96DR7 871 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 MYEOVQ96EZ4 313 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 BTN2A3PQ96KV6 586 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 PRICKLE1Q96MT3 831 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-225ENST00000556798 P2RY13Q9BPV8 354 aa18.14■□□□□ 0.49
SHMT2-225ENST00000556798 LRFN3Q9BTN0 628 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms