RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 FSCN3Q9NQT6 498 aa23.59■■□□□ 1.37
ACTN1-220ENST00000556433 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.59■■□□□ 1.37
ACTN1-220ENST00000556433 BICDL2A1A5D9 508 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 BIN1O00499 593 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 CALCAP01258 141 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 SERPINF2P08697 491 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 CEACAM1P13688 526 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 BRD2P25440 801 aaKnown RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 ATXN3P54252 364 aaPredicted RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 STX17P56962 302 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 GFPT1Q06210 699 aaPredicted RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 ENPP2Q13822 863 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 MORC3Q14149 939 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 ZNF234Q14588 700 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 EIF4HQ15056 248 aaKnown RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 STILQ15468 1287 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 RABEPKQ7Z6M1 372 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 METTL3Q86U44 580 aaKnown RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 EHBP1Q8NDI1 1231 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 SORCS1Q8WY21 1168 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 TMA16Q96EY4 203 aaKnown RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 GTPBP2Q9BX10 602 aaKnown RBP23.58■■□□□ 1.37
ACTN1-220ENST00000556433 CTNND2Q9UQB3 1225 aa23.58■■□□□ 1.37
ACTN1-220ENST00000556433 M0QYV0 167 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 MSI1O43347 362 aaKnown RBP23.57■■□□□ 1.36
ACTN1-220ENST00000556433 HOXD9P28356 352 aaPredicted RBP23.57■■□□□ 1.36
ACTN1-220ENST00000556433 CD6P30203 668 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 ARID5AQ03989 594 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 ZNF252P-AS1Q0IIN9 211 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 KCNH2Q12809 1159 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 ST3GAL2Q16842 350 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 ADGRF1Q5T601 910 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 TMEM215Q68D42 235 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 FOXR2Q6PJQ5 311 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 TMPRSS6Q8IU80 811 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 ARHGEF19Q8IW93 802 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 RGL4Q8IZJ4 473 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 RBBP8NLQ8NC74 664 aaPredicted RBP23.57■■□□□ 1.36
ACTN1-220ENST00000556433 DEFB124Q8NES8 71 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 IRGQQ8WZA9 623 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 MKRN2Q9H000 416 aaKnown RBP23.57■■□□□ 1.36
ACTN1-220ENST00000556433 CAPN10Q9HC96 672 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 ITM2CQ9NQX7 267 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 STOML2Q9UJZ1 356 aa23.57■■□□□ 1.36
ACTN1-220ENST00000556433 TNRC6BQ9UPQ9 1833 aaKnown RBP23.56■■□□□ 1.36
ACTN1-220ENST00000556433 CHD8Q9HCK8 2581 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 ASCC3Q8N3C0 2202 aaKnown RBP23.56■■□□□ 1.36
ACTN1-220ENST00000556433 GADD45BO75293 160 aaPredicted RBP23.56■■□□□ 1.36
ACTN1-220ENST00000556433 LATS1O95835 1130 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 GNA14O95837 355 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 ZNF445P59923 1031 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 SYCP2LQ5T4T6 812 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 FOXJ1Q92949 421 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 HSFY1Q96LI6 401 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 LAMA1P25391 3075 aa23.56■■□□□ 1.36
ACTN1-220ENST00000556433 EPHX1P07099 455 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 NCAM1P13591 858 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 GCNT1Q02742 428 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 MSANTD2Q6P1R3 559 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 SERPINA13PQ6UXR4 307 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 TRIM59Q8IWR1 403 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 HDDC3Q8N4P3 179 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 GOLGA1Q92805 767 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 SIPA1Q96FS4 1042 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 TOE1Q96GM8 510 aaKnown RBP23.55■■□□□ 1.36
ACTN1-220ENST00000556433 SRRTQ9BXP5 876 aaKnown RBP23.55■■□□□ 1.36
ACTN1-220ENST00000556433 SLC32A1Q9H598 525 aa23.55■■□□□ 1.36
ACTN1-220ENST00000556433 WSB2Q9NYS7 404 aaPredicted RBP23.55■■□□□ 1.36
ACTN1-220ENST00000556433 ARHGAP33O14559 1287 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 KRT37O76014 449 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 LTFP02788 710 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 PRKCHP24723 683 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 MAOBP27338 520 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 HLA-FP30511 346 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 FOXC1Q12948 553 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 PAK1Q13153 545 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 WDR45BQ5MNZ6 344 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 WFIKKN2Q8TEU8 576 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 CLEC4CQ8WTT0 213 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 PRCCQ92733 491 aaPredicted RBP23.54■■□□□ 1.36
ACTN1-220ENST00000556433 MIS12Q9H081 205 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 USP36Q9P275 1121 aaKnown RBP23.54■■□□□ 1.36
ACTN1-220ENST00000556433 PLA2G4CQ9UP65 541 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.54■■□□□ 1.36
ACTN1-220ENST00000556433 CEP192Q8TEP8 1941 aa23.54■■□□□ 1.36
ACTN1-220ENST00000556433 MAP1BP46821 2468 aaKnown RBP23.53■■□□□ 1.36
ACTN1-220ENST00000556433 FBXO21O94952 628 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 AFPP02771 609 aaKnown RBP23.53■■□□□ 1.36
ACTN1-220ENST00000556433 SYPP08247 313 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 OXTRP30559 389 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 SLC11A2P49281 568 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 TPMTP51580 245 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 TBX4P57082 545 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 PLEKHG6Q3KR16 790 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 CHST9Q7L1S5 443 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 UNC45BQ8IWX7 931 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 KREMEN1Q96MU8 473 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 GPR174Q9BXC1 333 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 INTS2Q9H0H0 1204 aaKnown RBP23.53■■□□□ 1.36
ACTN1-220ENST00000556433 ABCB8Q9NUT2 735 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms