RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CEP57Q86XR8 500 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 SCN4BQ8IWT1 228 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 SH2D3CQ8N5H7 860 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 ADAM32Q8TC27 787 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 WDCPQ9H6R7 721 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 DNAJC17Q9NVM6 304 aaKnown RBP15.23■□□□□ 0.03
VPS33B-205ENST00000556096 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
VPS33B-205ENST00000556096 COL4A6Q14031 1691 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 A6NNZ2 444 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 EEF2KO00418 725 aaKnown RBP15.22■□□□□ 0.03
VPS33B-205ENST00000556096 ALOX15BO15296 676 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 KCNN4O15554 427 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 TCEA3O75764 348 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 ABHD2P08910 425 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 SHHQ15465 462 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 TUBB8Q3ZCM7 444 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 BTBD8Q5XKL5 378 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 RFX8Q6ZV50 586 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 CENPUQ71F23 418 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 TAC4Q86UU9 113 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 NUP93Q8N1F7 819 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 DQX1Q8TE96 717 aaKnown RBP15.22■□□□□ 0.03
VPS33B-205ENST00000556096 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 OLFM3Q96PB7 478 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 QKIQ96PU8 341 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS33B-205ENST00000556096 GDF15Q99988 308 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 CENPHQ9H3R5 247 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 FBXO44Q9H4M3 255 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 SAYSD1Q9NPB0 183 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 ANLNQ9NQW6 1124 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 TMPRSS4Q9NRS4 437 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 ETNK2Q9NVF9 386 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 IL37Q9NZH6 218 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.22■□□□□ 0.03
VPS33B-205ENST00000556096 CXXC1Q9P0U4 656 aaPredicted RBP15.22■□□□□ 0.03
VPS33B-205ENST00000556096 SCML2Q9UQR0 700 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 RANBP2P49792 3224 aaKnown RBP15.22■□□□□ 0.03
VPS33B-205ENST00000556096 VWA8A3KMH1 1905 aa15.22■□□□□ 0.03
VPS33B-205ENST00000556096 DCLK1O15075 740 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 GCATO75600 419 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 ZNF189O75820 626 aaPredicted RBP15.21■□□□□ 0.03
VPS33B-205ENST00000556096 UPP2O95045 317 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 ACSL3O95573 720 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 FGBP02675 491 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 NR1D1P20393 614 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 GPR17Q13304 367 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 KCNT2Q6UVM3 1135 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 ANKS3Q6ZW76 656 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 SCD5Q86SK9 330 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 MON1AQ86VX9 555 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 ARFGAP2Q8N6H7 521 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 SPPL2BQ8TCT7 592 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 OSBPL2Q9H1P3 480 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 LRRC4CQ9HCJ2 640 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 HCSTQ9UBK5 93 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 RAD54BQ9Y620 910 aa15.21■□□□□ 0.03
VPS33B-205ENST00000556096 ABHD14A-ACY1A0A1B0GW23 586 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 C5orf60A6NFR6 353 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 E7ESA3 106 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 I6L893 689 aaPredicted RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 RASGRF2O14827 1237 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 CHADO15335 359 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 CREB3O43889 395 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 EFEMP2O95967 443 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 MAGEA6P43360 314 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 ARL4CP56559 192 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 HIF1AQ16665 826 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 BRMS1LQ5PSV4 323 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 ANKRD22Q5VYY1 191 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 FAM117BQ6P1L5 589 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 PDZD4Q76G19 769 aaPredicted RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 B4GALNT4Q76KP1 1039 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 ARHGAP18Q8N392 663 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 UHMK1Q8TAS1 419 aaKnown RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 TFB1MQ8WVM0 346 aaKnown RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 SERPINB12Q96P63 405 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 TTPALQ9BTX7 342 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 FRMD8Q9BZ67 464 aaPredicted RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 TKTL2Q9H0I9 626 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 SMOC2Q9H3U7 446 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 COMMD8Q9NX08 183 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 ARHGEF38Q9NXL2 777 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 BCCIPQ9P287 314 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 NOVA2Q9UNW9 492 aaKnown RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 FAM92AA1XBS5 289 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 NT5C1B-RDH14C9J2C7 533 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 FAM72CH0Y354 149 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 IRAK2O43187 625 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 BASP1P80723 227 aaKnown RBP15.2■□□□□ 0.02
VPS33B-205ENST00000556096 DEFB103AP81534 67 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 KCNJ11Q14654 390 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 STAT4Q14765 748 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 DDR2Q16832 855 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 TNFAIP8L3Q5GJ75 292 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 FAM72AQ5TYM5 149 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 FAM72DQ6L9T8 149 aa15.2■□□□□ 0.02
VPS33B-205ENST00000556096 PSRC1Q6PGN9 363 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms