RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SLC11A2P49281 568 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 APBA1Q02410 837 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 MAN2A1Q16706 1144 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 KIAA1324Q6UXG2 1013 aaKnown RBP25.47■■□□□ 1.67
PRKCH-216ENST00000555542 IRF2BP1Q8IU81 584 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 PIWIL1Q96J94 861 aaKnown RBP25.47■■□□□ 1.67
PRKCH-216ENST00000555542 TRIM62Q9BVG3 475 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 ACP6Q9NPH0 428 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 MBD1Q9UIS9 605 aaPredicted RBP25.47■■□□□ 1.67
PRKCH-216ENST00000555542 CLEC4EQ9ULY5 219 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 PLXND1Q9Y4D7 1925 aa25.47■■□□□ 1.67
PRKCH-216ENST00000555542 KHNYNO15037 678 aaKnown RBP25.46■■□□□ 1.67
PRKCH-216ENST00000555542 NPC1O15118 1278 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 AP5Z1O43299 807 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 ZNF217O75362 1048 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 PON1P27169 355 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 HOXD9P28356 352 aaPredicted RBP25.46■■□□□ 1.67
PRKCH-216ENST00000555542 LIMK1P53667 647 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 RPL6Q02878 288 aaKnown RBP25.46■■□□□ 1.67
PRKCH-216ENST00000555542 EIF4HQ15056 248 aaKnown RBP25.46■■□□□ 1.67
PRKCH-216ENST00000555542 HSP90AA4PQ58FG1 418 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 STPG1Q5TH74 334 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 RNF43Q68DV7 783 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 SLC36A4Q6YBV0 504 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 SERPINB11Q96P15 392 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 EDEM2Q9BV94 578 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 ELOVL2Q9NXB9 296 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 STOML2Q9UJZ1 356 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 CYP8B1Q9UNU6 501 aa25.46■■□□□ 1.67
PRKCH-216ENST00000555542 PES1O00541 588 aaKnown RBP25.45■■□□□ 1.66
PRKCH-216ENST00000555542 SYNCRIPO60506 623 aaKnown RBP25.45■■□□□ 1.66
PRKCH-216ENST00000555542 MEA1Q16626 185 aa25.45■■□□□ 1.66
PRKCH-216ENST00000555542 LYSMD4Q5XG99 296 aa25.45■■□□□ 1.66
PRKCH-216ENST00000555542 STK32AQ8WU08 396 aa25.45■■□□□ 1.66
PRKCH-216ENST00000555542 DDX1Q92499 740 aaKnown RBP25.45■■□□□ 1.66
PRKCH-216ENST00000555542 THAP10Q9P2Z0 257 aaPredicted RBP25.45■■□□□ 1.66
PRKCH-216ENST00000555542 NAALADL1Q9UQQ1 740 aa25.45■■□□□ 1.66
PRKCH-216ENST00000555542 TYW5A2RUC4 315 aaKnown RBP25.44■■□□□ 1.66
PRKCH-216ENST00000555542 E5RJQ4 531 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 IGLV3-27P01718 113 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 ERCC5P28715 1186 aaPredicted RBP25.44■■□□□ 1.66
PRKCH-216ENST00000555542 IL12RB1P42701 662 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 RING1Q06587 406 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 PPM1JQ5JR12 505 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 DEFB119Q8N690 84 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 DQX1Q8TE96 717 aaKnown RBP25.44■■□□□ 1.66
PRKCH-216ENST00000555542 DDX50Q9BQ39 737 aaKnown RBP25.44■■□□□ 1.66
PRKCH-216ENST00000555542 SLC6A17Q9H1V8 727 aa25.44■■□□□ 1.66
PRKCH-216ENST00000555542 BECN2A8MW95 431 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 TIMM44O43615 452 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 ACSL4O60488 711 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 PTGER3P43115 390 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 RPL34P49207 117 aaKnown RBP25.43■■□□□ 1.66
PRKCH-216ENST00000555542 PTK2Q05397 1052 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 ZNF234Q14588 700 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 SPDYCQ5MJ68 293 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 RFWD3Q6PCD5 774 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 SERPINA13PQ6UXR4 307 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 ADAM32Q8TC27 787 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 SORCS1Q8WY21 1168 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 SHC3Q92529 594 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 MRGPRX1Q96LB2 322 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 TUBGCP2Q9BSJ2 902 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 SLC4A5Q9BY07 1137 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 DNAJC12Q9UKB3 198 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 TLR6Q9Y2C9 796 aa25.43■■□□□ 1.66
PRKCH-216ENST00000555542 ATXN2Q99700 1313 aaKnown RBP25.42■■□□□ 1.66
PRKCH-216ENST00000555542 CEP192Q8TEP8 1941 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 GOLGA6L7A0A1B0GV03 622 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 PATE3B3GLJ2 98 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 IRAK2O43187 625 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 TBL1XO60907 577 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 NDUFS2O75306 463 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 HLA-FP30511 346 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 DPP6P42658 865 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 PDCLQ13371 301 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 FUT11Q495W5 492 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 VWA3BQ502W6 1294 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 SYT12Q8IV01 421 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 PASD1Q8IV76 773 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 WFIKKN2Q8TEU8 576 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 NDST4Q9H3R1 872 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 PRDM16Q9HAZ2 1276 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 POPDC2Q9HBU9 364 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 CD248Q9HCU0 757 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 ABCB8Q9NUT2 735 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 STIM2Q9P246 746 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 CYTH4Q9UIA0 394 aa25.42■■□□□ 1.66
PRKCH-216ENST00000555542 IGHV1OR15-9A0A0B4J2B8 117 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 LNP1A1A4G5 178 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 PAPSS1O43252 624 aaPredicted RBP25.41■■□□□ 1.66
PRKCH-216ENST00000555542 MOCS2O96007 188 aaPredicted RBP25.41■■□□□ 1.66
PRKCH-216ENST00000555542 FYNP06241 537 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 EPHX1P07099 455 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 SGSHP51688 502 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 FNDC3BQ53EP0 1204 aaKnown RBP25.41■■□□□ 1.66
PRKCH-216ENST00000555542 TRIM61Q5EBN2 209 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 CHST9Q7L1S5 443 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 TMEM110Q86TL2 294 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 TAC4Q86UU9 113 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms