RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 NTSR1P30989 418 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 PGDP52209 483 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 SUMO3P55854 103 aaPredicted RBP3.63□□□□□ -1.83
SRP54-207ENST00000555535 DLX5P56178 289 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 MCL1Q07820 350 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 ZRSR1Q15695 479 aaKnown RBP3.63□□□□□ -1.83
SRP54-207ENST00000555535 PIK3CD-AS1Q5SR53 167 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 C9orf57Q5W0N0 161 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 DSTYKQ6XUX3 929 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 USP49Q70CQ1 688 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 EPM2AIP1Q7L775 607 aaPredicted RBP3.63□□□□□ -1.83
SRP54-207ENST00000555535 C11orf44Q8N8P7 122 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 TRIM43Q96BQ3 446 aaPredicted RBP3.63□□□□□ -1.83
SRP54-207ENST00000555535 GPATCH3Q96I76 525 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 DOCK7Q96N67 2140 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 B3GNT5Q9BYG0 378 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 C22orf23Q9BZE7 217 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 RIMKLBQ9ULI2 386 aa3.63□□□□□ -1.83
SRP54-207ENST00000555535 SRRM3A6NNA2 597 aaPredicted RBP3.62□□□□□ -1.83
SRP54-207ENST00000555535 CCP110O43303 1012 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 PRAMEF2O60811 474 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 ALDH1L1O75891 902 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 DSC1Q08554 894 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 PIN1Q13526 163 aaPredicted RBP3.62□□□□□ -1.83
SRP54-207ENST00000555535 C6orf10Q5SRN2 563 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 ISM2Q6H9L7 571 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 MAEAQ7L5Y9 396 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 PRR26Q8N8Z3 221 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 TMEM174Q8WUU8 243 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 PRR11Q96HE9 360 aaPredicted RBP3.62□□□□□ -1.83
SRP54-207ENST00000555535 DUX5Q96PT3 197 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 C1QTNF5Q9BXJ0 243 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 TCF7L2Q9NQB0 619 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 SACM1LQ9NTJ5 587 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 IPO11Q9UI26 975 aaKnown RBP3.62□□□□□ -1.83
SRP54-207ENST00000555535 ZNF180Q9UJW8 692 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 PAXBP1Q9Y5B6 917 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 INSL5Q9Y5Q6 135 aa3.62□□□□□ -1.83
SRP54-207ENST00000555535 MBD3L4A6NDZ8 208 aaPredicted RBP3.61□□□□□ -1.83
SRP54-207ENST00000555535 MBD3L3A6NE82 208 aaPredicted RBP3.61□□□□□ -1.83
SRP54-207ENST00000555535 C16orf96A6NNT2 1141 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 CA12O43570 354 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 RASSF9O75901 435 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 PIAS2O75928 621 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 MBPP02686 304 aaPredicted RBP3.61□□□□□ -1.83
SRP54-207ENST00000555535 PRSS2P07478 247 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 RAB27AP51159 221 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 CCDC15Q0P6D6 951 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 KIF5AQ12840 1032 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 TRAF2Q12933 501 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 STK3Q13188 491 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 ARHGEF7Q14155 803 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 KCNJ12Q14500 433 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 TTF1Q15361 905 aaPredicted RBP3.61□□□□□ -1.83
SRP54-207ENST00000555535 PTPROQ16827 1216 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 C3orf38Q5JPI3 329 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 TTLL5Q6EMB2 1281 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 ZNF449Q6P9G9 518 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 APOA5Q6Q788 366 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 TFAP2DQ7Z6R9 452 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 KAT2BQ92831 832 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 STK31Q9BXU1 1019 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 RETREG1Q9H6L5 497 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 DNAJB11Q9UBS4 358 aa3.61□□□□□ -1.83
SRP54-207ENST00000555535 G3BP2Q9UN86 482 aaKnown RBP3.61□□□□□ -1.83
SRP54-207ENST00000555535 GAGE12JA6NER3 117 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 RAB27BO00194 218 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 PPP1R3DO95685 299 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 IGLV2-11P01706 119 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 IL1R1P14778 569 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 ST6GAL1P15907 406 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 KLRC1P26715 233 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 HOXD3P31249 432 aaPredicted RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 HOXC13P31276 330 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 PCYT1AP49585 367 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 SEC61A1P61619 476 aaKnown RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 WDR5P61964 334 aaKnown RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 Q0VFX4 171 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 KCNAB1Q14722 419 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 PMS2CLQ68D20 193 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 GRHL2Q6ISB3 625 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 KIAA0319LQ8IZA0 1049 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 CTCFLQ8NI51 663 aaPredicted RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 ZCRB1Q8TBF4 217 aaKnown RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 STAG1Q8WVM7 1258 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 NMD3Q96D46 503 aaKnown RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 SUCLG2Q96I99 432 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 DHX36Q9H2U1 1008 aaKnown RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 SIRT3Q9NTG7 399 aaPredicted RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 DKK4Q9UBT3 224 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 MAGED2Q9UNF1 606 aaPredicted RBP3.6□□□□□ -1.83
SRP54-207ENST00000555535 SLC27A6Q9Y2P4 619 aa3.6□□□□□ -1.83
SRP54-207ENST00000555535 CAPN8A6NHC0 703 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 MDM4O15151 490 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 CTNND1O60716 968 aaKnown RBP3.59□□□□□ -1.83
SRP54-207ENST00000555535 GLUD1P00367 558 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 LDLRP01130 860 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms