RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ACVR1CQ8NER5 493 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 LPAR1Q92633 364 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 AGAP2Q99490 1192 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 GORASP1Q9BQQ3 440 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 GRIP2Q9C0E4 1043 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 SEMA6AQ9H2E6 1030 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 S100A14Q9HCY8 104 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 TXNDC16Q9P2K2 825 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 SNX9Q9Y5X1 595 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 PDE4DIPQ5VU43 2346 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 KIF3CO14782 793 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 ARIH2O95376 493 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 ENO3P13929 434 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 GPD2P43304 727 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 NUDT2P50583 147 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 PITX1P78337 314 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 KRT72Q14CN4 511 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 CYTH1Q15438 398 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 PPP1R26Q5T8A7 1209 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 PDPK2PQ6A1A2 396 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 EGFL6Q8IUX8 553 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 MAPK15Q8TD08 544 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 HACL1Q9UJ83 578 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 RTN3O95197 1032 aaPredicted RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 GOT1P17174 413 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 RPL10P27635 214 aaKnown RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 STIP1P31948 543 aaKnown RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 PDK1Q15118 436 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 SLC9B1Q4ZJI4 515 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 LIN52Q52LA3 116 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 CYP4V2Q6ZWL3 525 aaPredicted RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 DHDDSQ86SQ9 333 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 MYLK4Q86YV6 388 aaPredicted RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 ZNF781Q8N8C0 355 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 PIWIL2Q8TC59 973 aaKnown RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 ACAD9Q9H845 621 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 LIN28AQ9H9Z2 209 aaKnown RBP17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 PCDH18Q9HCL0 1135 aa17.58■□□□□ 0.41
PPP4R3A-208ENST00000555462 NUP205Q92621 2012 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 AHDC1Q5TGY3 1603 aaPredicted RBP17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 ZBTB14O43829 449 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 CHRNGP07510 517 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 DPEP1P16444 411 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 SCNN1BP51168 640 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 TRMT5Q32P41 509 aaKnown RBP17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 TEDDM1Q5T9Z0 273 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 MFN1Q8IWA4 741 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 IFT43Q96FT9 208 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 HPDLQ96IR7 371 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 MPP4Q96JB8 637 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 OR52B2Q96RD2 323 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 TUBB6Q9BUF5 446 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 COPS7BQ9H9Q2 264 aaPredicted RBP17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 CNTN6Q9UQ52 1028 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 NFASCO94856 1347 aa17.58■□□□□ 0.4
PPP4R3A-208ENST00000555462 HNRNPRO43390 633 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 C1QAP02745 245 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 VCLP18206 1134 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 ANGEL2Q5VTE6 544 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 RPS27LQ71UM5 84 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 TFB1MQ8WVM0 346 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 SIGLEC10Q96LC7 697 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 SPATA16Q9BXB7 569 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 XPNPEP3Q9NQH7 507 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 NRBP2Q9NSY0 501 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 PAK5Q9P286 719 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 CPSF3Q9UKF6 684 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 EMCNQ9ULC0 261 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 POMPQ9Y244 141 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 STYXL1Q9Y6J8 313 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 CSPG5O95196 566 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 STAG3L1P0CL83 205 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 SDC4P31431 198 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 CPOXP36551 454 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 NRF1Q16656 503 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 NET1Q7Z628 596 aaPredicted RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 ZBTB8OSQ8IWT0 167 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 CCDC185Q8N715 623 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 UBR7Q8N806 425 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 CDT1Q9H211 546 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 UBR3Q6ZT12 1888 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 EVPLQ92817 2033 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 IDH3AP50213 366 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 EFCAB12Q6NXP0 572 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 SNRNP27Q8WVK2 155 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 EZH1Q92800 747 aaPredicted RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 ABTB1Q969K4 478 aaPredicted RBP17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 TEX13BQ9BXU2 312 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 KLHL4Q9C0H6 718 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 SIRPGQ9P1W8 387 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 CDH22Q9UJ99 828 aa17.57■□□□□ 0.4
PPP4R3A-208ENST00000555462 SDR42E2A6NKP2 422 aa17.56■□□□□ 0.4
PPP4R3A-208ENST00000555462 H0YCG3 227 aa17.56■□□□□ 0.4
PPP4R3A-208ENST00000555462 FAM189A1O60320 539 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms