RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 OXCT2Q9BYC2 517 aaPredicted RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 RXFP1Q9HBX9 757 aa10.57□□□□□ -0.72
NEK9-205ENST00000555405 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
NEK9-205ENST00000555405 NUP205Q92621 2012 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 SGK1O00141 431 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 IRAK2O43187 625 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TADA3O75528 432 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 PRLRP16471 622 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 MAN1A1P33908 653 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 OTUD4Q01804 1114 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 OTUD1Q5VV17 481 aaPredicted RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 DARS2Q6PI48 645 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 CCDC137Q6PK04 289 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 GAREM2Q75VX8 874 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TP53INP2Q8IXH6 220 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 P3H4Q92791 437 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 SERPINB11Q96P15 392 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 EPB41L5Q9HCM4 733 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 ASIC3Q9UHC3 531 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 MRPS23Q9Y3D9 190 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 I6L893 689 aaPredicted RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 AVPR1AP37288 418 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 CDKN2BP42772 138 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 CLCN4P51793 760 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 CREMQ03060 361 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TUBB2AQ13885 445 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 DPYSL3Q14195 570 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TCEAL1Q15170 157 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TRADDQ15628 312 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TPGS1Q6ZTW0 290 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 C14orf80Q86SX3 495 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 NIPA2Q8N8Q9 360 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 PRELID2Q8N945 189 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 SPATA17Q96L03 361 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TMEM121Q9BTD3 319 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TUBB2BQ9BVA1 445 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 DNAJC17Q9NVM6 304 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 FBXW11Q9UKB1 542 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 DNPEPQ9ULA0 475 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 COLQQ9Y215 455 aaPredicted RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 CPQQ9Y646 472 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 hCG_1818297A0A087WSY0 165 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 DFFAO00273 331 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 LINC01565O15544 149 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 RAD51CO43502 376 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 HEXIM1O94992 359 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 RHOP08100 348 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 ETS1P14921 441 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 L1CAMP32004 1257 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 HARS2P49590 506 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 TUBP50607 506 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 GBE1Q04446 702 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 ACAP1Q15027 740 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 TEAD2Q15562 447 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 PCDH19Q8TAB3 1148 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 PSMG2Q969U7 264 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
NEK9-205ENST00000555405 FZD10Q9ULW2 581 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 SNX24Q9Y343 169 aa10.56□□□□□ -0.72
NEK9-205ENST00000555405 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
NEK9-205ENST00000555405 DPYSL4O14531 572 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 APOL1O14791 398 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 NEBLO76041 1014 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 LRIG2O94898 1065 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 ERCC2P18074 760 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 RPL34P49207 117 aaKnown RBP10.55□□□□□ -0.72
NEK9-205ENST00000555405 EIF3EP60228 445 aaKnown RBP10.55□□□□□ -0.72
NEK9-205ENST00000555405 PABPC1LQ4VXU2 614 aaKnown RBP10.55□□□□□ -0.72
NEK9-205ENST00000555405 ANKRD20A8PQ5CZ79 823 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 TCEAL5Q5H9L2 206 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 LILRA6Q6PI73 481 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 USP33Q8TEY7 942 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 WBP2Q969T9 261 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 EPAS1Q99814 870 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 SPON2Q9BUD6 331 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 EFCAB8A8MWE9 144 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 H3BRJ5 948 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 EFEMP2O95967 443 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 RBP3P10745 1247 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 WEE1P30291 646 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 CCR2P41597 374 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 LGI2Q8N0V4 545 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 CSPG4P5Q96PW8 444 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 RNF157Q96PX1 679 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 TRIM62Q9BVG3 475 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.55□□□□□ -0.72
NEK9-205ENST00000555405 CLDND1Q9NY35 253 aa10.55□□□□□ -0.72
NEK9-205ENST00000555405 DNMT3BQ9UBC3 853 aaKnown RBP10.55□□□□□ -0.72
NEK9-205ENST00000555405 XYLBO75191 536 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 PTPN2P17706 415 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms