RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 E7EVH7 732 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 EPB41L2O43491 1005 aaKnown RBP6.07□□□□□ -1.44
VRK1-205ENST00000555402 JUPP14923 745 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 GRIA3P42263 894 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 LMOD3Q0VAK6 560 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 TBX2Q13207 712 aaPredicted RBP6.07□□□□□ -1.44
VRK1-205ENST00000555402 SLC12A1Q13621 1099 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 ST3GAL2Q16842 350 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 VWA1Q6PCB0 445 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 DPY19L3Q6ZPD9 716 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 LRRC71Q8N4P6 559 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 NAXEQ8NCW5 288 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 ASB12Q8WXK4 309 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 ZNF48Q96MX3 618 aaPredicted RBP6.07□□□□□ -1.44
VRK1-205ENST00000555402 ALG8Q9BVK2 526 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 CCDC134Q9H6E4 229 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 CHODLQ9H9P2 273 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 TRIM36Q9NQ86 728 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 KLC4Q9NSK0 619 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 EHD3Q9NZN3 535 aa6.07□□□□□ -1.44
VRK1-205ENST00000555402 ADGRA2Q96PE1 1338 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 FAM90A18PA6NE21 464 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 FAM90A16PA6NEW6 464 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 FAM90A9PA6NNJ1 464 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 FAM90A5PA8MXJ8 464 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 DHHO43323 396 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 IL6RP08887 468 aaPredicted RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 ELFN1P0C7U0 828 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 FAM90A15PP0C7V4 464 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 FAM90A14PP0C7W9 464 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 PRR35P0CG20 571 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 XBP1P17861 261 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 SERPINA4P29622 427 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 SUMO2P61956 95 aaKnown RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 RNASELQ05823 741 aaKnown RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 SF3A3Q12874 501 aaKnown RBP eCLIP6.06□□□□□ -1.44
VRK1-205ENST00000555402 SEMA3BQ13214 749 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 TRIM60Q495X7 471 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 ZNF626Q68DY1 528 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 MSANTD2Q6P1R3 559 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 RINLQ6ZS11 566 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 AMIGO2Q86SJ2 522 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 TRABD2AQ86V40 505 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 HERC6Q8IVU3 1022 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 TMEM57Q8N5G2 664 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 ESX1Q8N693 406 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 NGDNQ8NEJ9 315 aaKnown RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 CEP70Q8NHQ1 597 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 SLC22A17Q8WUG5 538 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 SDCCAG3Q96C92 435 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 RSPRY1Q96DX4 576 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 REXO5Q96IC2 774 aaKnown RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 MAELQ96JY0 434 aaKnown RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 LIN7CQ9NUP9 197 aaKnown RBP6.06□□□□□ -1.44
VRK1-205ENST00000555402 FBXO28Q9NVF7 368 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 GGA3Q9NZ52 723 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 NDUFAF4Q9P032 175 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 DKK3Q9UBP4 350 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 KCND3Q9UK17 655 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 GJD2Q9UKL4 321 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 PCDHB7Q9Y5E2 793 aa6.06□□□□□ -1.44
VRK1-205ENST00000555402 ZNF521Q96K83 1311 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 A0A1B0GVC2 190 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 AP4M1O00189 453 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 CES2O00748 559 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 CBFA2T3O75081 653 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 PMPCBO75439 489 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 NXPH3O95157 252 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 LARGE1O95461 756 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 TK1P04183 234 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 CREB1P16220 341 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 GKP32189 559 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 DDIT3P35638 169 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 RBM5P52756 815 aaKnown RBP eCLIP6.05□□□□□ -1.44
VRK1-205ENST00000555402 DGKQP52824 942 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 TPTEP56180 551 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 MTAPQ13126 283 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 G3BP1Q13283 466 aaKnown RBP eCLIP6.05□□□□□ -1.44
VRK1-205ENST00000555402 BMPR2Q13873 1038 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 EFR3AQ14156 821 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 TTC22Q5TAA0 569 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 ANKRD40Q6AI12 368 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 CCDC144NLQ6NUI1 221 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 PIK3AP1Q6ZUJ8 805 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 SYT13Q7L8C5 426 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 TFAP2BQ92481 460 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 MCRS1Q96EZ8 462 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 PPM1MQ96MI6 270 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 SEC62Q99442 399 aaKnown RBP6.05□□□□□ -1.44
VRK1-205ENST00000555402 ZHX3Q9H4I2 956 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 BAG5Q9UL15 447 aa6.05□□□□□ -1.44
VRK1-205ENST00000555402 RRP7AQ9Y3A4 280 aaKnown RBP6.05□□□□□ -1.44
VRK1-205ENST00000555402 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 PRRT4C9JH25 899 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 J3KRW8 73 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 EYA2O00167 538 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
VRK1-205ENST00000555402 PROM1O43490 865 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 CBSLP0DN79 551 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms