RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TRIB2Q92519 343 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 XYLT2Q9H1B5 865 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 CYP4F12Q9HCS2 524 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 C3orf70A6NLC5 250 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 HSPA4LO95757 839 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 QPCTQ16769 361 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 CIR1Q86X95 450 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ANKRD52Q8NB46 1076 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 TMEM169Q96HH4 297 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 KLHL5Q96PQ7 755 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 RNF157Q96PX1 679 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 LRRC37BQ96QE4 947 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ETNK2Q9NVF9 386 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 GTSE1Q9NYZ3 720 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 WHRNQ9P202 907 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 STXBP5LQ9Y2K9 1186 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ATP8B3O60423 1300 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 ERCC2P18074 760 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 TGM2P21980 687 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 EDNRBP24530 442 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 TUBP50607 506 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 TIGD5Q53EQ6 642 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 SPATA21Q7Z572 469 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 SAPCD2Q86UD0 394 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 CHST12Q9NRB3 414 aa12.6□□□□□ -0.39
ARHGEF40-206ENST00000555232 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■□□□□ 11
ARHGEF40-206ENST00000555232 TMEM88BA6NKF7 163 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 GIPC1O14908 333 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 BEST1O76090 585 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 ANP32DO95626 131 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 STIP1P31948 543 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 SCTRP47872 440 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 DUSP4Q13115 394 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 USP10Q14694 798 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PDK1Q15118 436 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 CD302Q8IX05 232 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 TCP10LQ8TDR4 215 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 RSPH1Q8WYR4 309 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 STRA6Q9BX79 667 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 MUC3BQ9H195 1237 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 KLHL33A6NCF5 533 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 LGR5O75473 907 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 SNUPNO95149 360 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 FAM107AO95990 144 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 CKMP06732 381 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 BGNP21810 368 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 RPA3P35244 121 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PCK1P35558 622 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 GARSP41250 739 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 CDKN2BP42772 138 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PLK1P53350 603 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 GEMIN4P57678 1058 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 INHBEP58166 350 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 ARHGEF6Q15052 776 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 KDM7AQ6ZMT4 941 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 EXOC3L1Q86VI1 746 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 CYP4X1Q8N118 509 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 RASGEF1CQ8N431 466 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 TTC30BQ8N4P2 665 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZNF513Q8N8E2 541 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 DTX3LQ8TDB6 740 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 NUDCD1Q96RS6 583 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 OSBPL7Q9BZF2 842 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PCDH18Q9HCL0 1135 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 C2orf71A6NGG8 1288 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 APOC4-APOC2K7ER74 178 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 CBX4O00257 560 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 SMIM24O75264 130 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 DGKIO75912 1065 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 APOC2P02655 101 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PGGT1BP53609 377 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 RPS6KA2Q15349 733 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 ARRDC4Q8NCT1 418 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 HTR3CQ8WXA8 447 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 AUTS2Q8WXX7 1259 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 CCT6BQ92526 530 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 MECRQ9BV79 373 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 LRRC19Q9H756 370 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 NRDE2Q9H7Z3 1164 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PCDH9Q9HC56 1237 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PDLIM7Q9NR12 457 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 GRHL1Q9NZI5 618 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 PCYOX1Q9UHG3 505 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 KIAA1257Q9ULG3 409 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
ARHGEF40-206ENST00000555232 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms