RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 KRT5P13647 590 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 CEACAM1P13688 526 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 CETN2P41208 172 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 DRG2P55039 364 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 SKOR1P84550 965 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 DR1Q01658 176 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 FMO1Q01740 532 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 MCL1Q07820 350 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 CLEC16AQ2KHT3 1053 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 CTXN3Q4LDR2 81 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 DAB2IPQ5VWQ8 1189 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 ACAD10Q6JQN1 1059 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 SYDE1Q6ZW31 735 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 NOP9Q86U38 636 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 HOOK3Q86VS8 718 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 BRSK2Q8IWQ3 736 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 SYNPOQ8N3V7 929 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 ARHGEF26Q96DR7 871 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 VCPIP1Q96JH7 1222 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 UROC1Q96N76 676 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 ZMAT2Q96NC0 199 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 FAM213AQ9BRX8 229 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 MSTO1Q9BUK6 570 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 DDX47Q9H0S4 455 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 TSPYL1Q9H0U9 437 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 FBRSL1Q9HCM7 1045 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 MRPL47Q9HD33 250 aaKnown RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 OSGEPQ9NPF4 335 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 RBAKQ9NYW8 714 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-216ENST00000554975 TSC2P49815 1807 aa11.64□□□□□ -0.55
SHMT2-216ENST00000554975 OTOL1A6NHN0 477 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-216ENST00000554975 OGTO15294 1046 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 MEFVO15553 781 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-216ENST00000554975 CYP26A1O43174 497 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 PHACTR2O75167 634 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 EGFP01133 1207 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 CAPNS1P04632 268 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 CLTAP09496 248 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 OR4Q2P0C623 313 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 CXCL8P10145 99 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 TNNI1P19237 187 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 CSRP1P21291 193 aaKnown RBP11.63□□□□□ -0.55
SHMT2-216ENST00000554975 NSFP46459 744 aaKnown RBP11.63□□□□□ -0.55
SHMT2-216ENST00000554975 RWDD2BP57060 319 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 TMEM196Q5HYL7 178 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 C19orf48Q6RUI8 117 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 CEP128Q6ZU80 1094 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 GAREM2Q75VX8 874 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 WDR49Q8IV35 697 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 TAS1R2Q8TE23 839 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 E2F7Q96AV8 911 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 FAXDC2Q96IV6 333 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 ZIM3Q96PE6 472 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 TMEM209Q96SK2 561 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 FMO2Q99518 471 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 NUP85Q9BW27 656 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 HAPLN2Q9GZV7 340 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
SHMT2-216ENST00000554975 RPF1Q9H9Y2 349 aaKnown RBP11.63□□□□□ -0.55
SHMT2-216ENST00000554975 SLC8A2Q9UPR5 921 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 INVSQ9Y283 1065 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 NUB1Q9Y5A7 615 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 ALG6Q9Y672 507 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 MAST4O15021 2626 aa11.63□□□□□ -0.55
SHMT2-216ENST00000554975 PTPRBP23467 1997 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 SHROOM3Q8TF72 1996 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 H7C4K7 107 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 AGPSO00116 658 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 SYN3O14994 580 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 PSTPIP1O43586 416 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 HLA-DRAP01903 254 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 MYZAPP0CAP1 466 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 KCNE1P15382 129 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 TNFSF9P41273 254 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 CENPCQ03188 943 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 PTP4A2Q12974 167 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 CYP1B1Q16678 543 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 KYAT1Q16773 422 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 UAP1L1Q3KQV9 507 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 XKR4Q5GH76 650 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 AGBL2Q5U5Z8 902 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 ALKAL1Q6UXT8 129 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 KDM7AQ6ZMT4 941 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 TTC9BQ8N6N2 239 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 LEMD2Q8NC56 503 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 GRK7Q8WTQ7 553 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 SEMA4DQ92854 862 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 C18orf25Q96B23 403 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-216ENST00000554975 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 PGLYRP2Q96PD5 576 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 BBC3Q96PG8 261 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-216ENST00000554975 STMN4Q9H169 189 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-216ENST00000554975 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 TMEM9BQ9NQ34 198 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 HPS4Q9NQG7 708 aa11.62□□□□□ -0.55
SHMT2-216ENST00000554975 HOMER3Q9NSC5 361 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms