RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 TRIM24O15164 1050 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 TSPAN3O60637 253 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 KLF8O95600 359 aaPredicted RBP13.76□□□□□ -0.21
APEX1-208ENST00000554813 APBB3O95704 486 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 APOEP02649 317 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 SLC2A3P11169 496 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 DGKEP52429 567 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 ARID5AQ03989 594 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 DMWDQ09019 674 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 E2F5Q15329 346 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 MPP7Q5T2T1 576 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 SDE2Q6IQ49 451 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 TRIM72Q6ZMU5 477 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 SLC26A9Q7LBE3 791 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 ASCL5Q7RTU5 278 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 TAC4Q86UU9 113 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 ALLCQ8N6M5 410 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
APEX1-208ENST00000554813 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 TXNDC5Q8NBS9 432 aaKnown RBP13.76□□□□□ -0.21
APEX1-208ENST00000554813 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
APEX1-208ENST00000554813 TSTD1Q8NFU3 115 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 CPA5Q8WXQ8 436 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 SLC39A13Q96H72 371 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
APEX1-208ENST00000554813 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 POLR3BQ9NW08 1133 aaPredicted RBP13.76□□□□□ -0.21
APEX1-208ENST00000554813 TMEM51Q9NW97 253 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 RRN3Q9NYV6 651 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
APEX1-208ENST00000554813 A0A1B0GTH6 734 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 TIMM44O43615 452 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 GRAP2O75791 330 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 ALDH1A2O94788 518 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 IGLV3-25P01717 112 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 NOS2P35228 1153 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 SCNN1AP37088 669 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 PXNP49023 591 aaPredicted RBP13.75□□□□□ -0.21
APEX1-208ENST00000554813 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
APEX1-208ENST00000554813 NOMO3P69849 1222 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 MTA1Q13330 715 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 CRY1Q16526 586 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 ZC3H12AQ5D1E8 599 aaKnown RBP13.75□□□□□ -0.21
APEX1-208ENST00000554813 PIK3R6Q5UE93 754 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 NAA35Q5VZE5 725 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 LUZP1Q86V48 1076 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 SLC20A1Q8WUM9 679 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 RNF34Q969K3 372 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 BTN2A3PQ96KV6 586 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
APEX1-208ENST00000554813 HHIPQ96QV1 700 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 POLMQ9NP87 494 aaPredicted RBP13.75□□□□□ -0.21
APEX1-208ENST00000554813 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■□□ 15.5
APEX1-208ENST00000554813 EBF1Q9UH73 591 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 RAB23Q9ULC3 237 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 MYO6Q9UM54 1294 aa13.75□□□□□ -0.21
APEX1-208ENST00000554813 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
APEX1-208ENST00000554813 GOLGA6L7A0A1B0GV03 622 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 ANTXRLA6NF34 631 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 PRRT4C9JH25 899 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 SGK1O00141 431 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 GFRA2O00451 464 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 AXIN1O15169 862 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 ZBTB24O43167 697 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 HRO43593 1189 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 DAB1O75553 588 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 MOCS2O96007 188 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 CYP1A1P04798 512 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 FERP16591 822 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 CHRNB2P17787 502 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 ABCB4P21439 1286 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 NTSR1P30989 418 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 CCR1P32246 355 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 MATKP42679 507 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 FMO1Q01740 532 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 SIM2Q14190 667 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 NR1I3Q14994 352 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 FAM133BQ5BKY9 247 aaKnown RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 FAM102AQ5T9C2 384 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 RFWD3Q6PCD5 774 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 XYLT1Q86Y38 959 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 CCDC117Q8IWD4 279 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
APEX1-208ENST00000554813 SUMF1Q8NBK3 374 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 STAP1Q9ULZ2 295 aa13.74□□□□□ -0.21
APEX1-208ENST00000554813 FANCMQ8IYD8 2048 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 SYNJ2BP-COX16A0A087WUM0 186 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 KCNU1A8MYU2 1149 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 M0QYT0 321 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 NPC1O15118 1278 aa13.73□□□□□ -0.21
APEX1-208ENST00000554813 TBL1XO60907 577 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms